Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0528 ATGAATTCTCAAATTGCAAACACAATCGATTTTGTTCAAATCCCTAAACCCTTTTTCCCTTCTAAAACCCTCTTCACCCATTTCCCATTTTCTTTACCCAACAACACTTTTTGTCATCGCTTTCTCAAAGCTAGATTCTCACATAACAACTCCATTACTCACCGAAAAAAACTCGTATTAACTAATGCTTCCAATTCTCTTTCAGATACACCTGTCTCTAAGAATGAAGAAGAAGGAGAAGATGTTGAGTCATCTCAACTATTCGAGAAACTGAAAGAGGCTGAAAGGAAACGGATAAATGAATTGGAAGAACTTGACAACAAGGCTAATGTGCAGTTAGAGAGGCAGCTTGTCATGGCTTCTTCATGGAGCAGAGCTTTGTTGACTTTGCGTGGAAAACTCAAGGGAACCGAGTGGGACCCGGAAAATTCACACAGGATAGACTTCAGCGATTTTTTGAGACTTCTTGACTCAAATAATGTCCAGTTTATGGAGTACTCAAATTATGGTCAAACAATATCAGTGATTCTGCCATATTACAAAAATGGGAAAACATCAGAAAGTGAAGGAAATTCTAAGGATATTATTTTTCGGCGTCATCCGGTTGATCGAATGCCAATTGATTCTTGGAATGATGTTTGGGGAAAGCTGCATCAGCAAATTGTAAATGTAGATGTCATTAATGTGGACAGTGTACCTGCTGAAGTATACTCAACTGTTGCAACTGCAGTTATATGGTCTATGCGTCTTGCCCTGGCTGTTGGTTTTTATGTGTGGATTGATAACTTGATGAGACCAATATATGCAAAGTTGATACCTTGTGATTTGGGAACTCCTACCCAAGAAACTAGGTTGCCACTCAAACGCCGCGCACTAGGGTCTCTAGGACAAAGTCGGGCTAAATTTATATCTGCAGAAGAAAGAACTGGTGTTACATTTGATGATTTTGCTGGCCAGGAATATATAAAGAGGGAACTACTGGAGATTGTCCGAATTTTAAAAAACGATGAGGAGTTTCAAGACCAAGGAATTTATAGTCCAAAAGGTGTGCTTCTTCATGGACCTCCTGGAACTGGTAAAACTCTACTGGCTAAGGCCATCGCTGGTGAAGCTGGGTTGCCTTTCTTTGCTGCAAATGGCACGGATTTTGTAGAGATGTTTGTAGGAGTTGCTGCATCCCGTGTTAAAGACCTTTTTGCTAATGCAAGATCCTTTGCACCTTCTATCATTTTTATTGATGAGATAGATGCTATTGGTAGCAAGCGTGGAGGACCTGATATTGGTGGAGGAGGTGCTGAGAGGGAACAAGGTTTACTTCAGATACTGACTGAGTTGGATGGATTCAAAGTTTCTACAGCTCAGGTGCTTGTGATAGGTGCTACAAATAGATTGGATATTCTTGATCCTGCTTTATTGAGGAAAGGTCGTTTTGACAAGATCATCAGAGTTGGTTTACCATCAAAAGATGGAAGATTTGCCATTTTGAAGGTGCATGCAAGGAATAAATATTTTCGTTCAGAGGAGGAAAAGGATATTTTACTTAAGGAAATTTCGGAGCTCACAGAAGATTTTACTGGGGCAGAGCTTCAAAATATACTGAATGAGGCTGGAATTTTGACAGCCAGGAAGGATTTGGACTACATTGGGCGAGATGAGCTACTTGAGGCATTAAAAAGGCAAAAAGGAACGTTTGAAACAGGGCAAGAGGATAGTACTGCAATTCCTGAAGATTTGAAACTGAGATTGGCATACCGAGAAGCAGCAGTTGCTGTTCTTGCTTGTTATTTTCCCGAGCCCCACCGCCCTTTTGTTGAGACTGATATAAATTCTATCCGCAGCCAGCCGAATATGCGTTACACTGAAATTTCTGGTCAGGTTTTTGCAAGGAAATTGGATTACGTAAACTCTATAGTGCGTGCTTGTGCTCCAAGAGTGATTGAGGAGGAGATGTTTGGGATTGACAACTTGTGTTGGATCTCTGCAAAGGCAACATTAGAAGCTTCAAGACGTGCTGAATTTTTAATTCTGCAGACAGGAATGACTGCATTTGGGAAGGCATACTACAAAAACCACAGTGATCTTGTGCCTAATCTTGTAACGAAGCTTGAGGCACTCCGAGATGAGTATATGCGTTATGCTACAGAGAAGTGTTCATCTGTGCTATACGAATACCAGTCAGCGGTTGAGACAATCACAGATATTTTGCTTGAAAAGGGTAAAATCAAAGCTGAGGAAATTTGGGAGATCTATAAGAGTGCTCCCCGTCTAGCCCAGCCTTCTGTTAGTCCAGTTGATGAGTATGGAGCACTTATTTATGCTGGACGGTGGGGAATCCATGGGATCAGCCTTTCAGGAAGGGTTACATTTGCCCCGGGCAATGTTGGATTTTCGACGTTTGGTGCACCCCGCCCTACAGAGACACAAATTGTTAGTGATGAAACTTGGAAACTAGTAGATCATATTTGGGATAAAAAGCTTGAAGATATTAGAGAAGATGCTTCAAGGGTGATTGAAGAAGAGAAACAAAAGCCACAACTTTTGATGGCAAGCCATTTCCTCTGA 2562 0.4126 MNSQIANTIDFVQIPKPFFPSKTLFTHFPFSLPNNTFCHRFLKARFSHNNSITHRKKLVLTNASNSLSDTPVSKNEEEGEDVESSQLFEKLKEAERKRINELEELDNKANVQLERQLVMASSWSRALLTLRGKLKGTEWDPENSHRIDFSDFLRLLDSNNVQFMEYSNYGQTISVILPYYKNGKTSESEGNSKDIIFRRHPVDRMPIDSWNDVWGKLHQQIVNVDVINVDSVPAEVYSTVATAVIWSMRLALAVGFYVWIDNLMRPIYAKLIPCDLGTPTQETRLPLKRRALGSLGQSRAKFISAEERTGVTFDDFAGQEYIKRELLEIVRILKNDEEFQDQGIYSPKGVLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFANARSFAPSIIFIDEIDAIGSKRGGPDIGGGGAEREQGLLQILTELDGFKVSTAQVLVIGATNRLDILDPALLRKGRFDKIIRVGLPSKDGRFAILKVHARNKYFRSEEEKDILLKEISELTEDFTGAELQNILNEAGILTARKDLDYIGRDELLEALKRQKGTFETGQEDSTAIPEDLKLRLAYREAAVAVLACYFPEPHRPFVETDINSIRSQPNMRYTEISGQVFARKLDYVNSIVRACAPRVIEEEMFGIDNLCWISAKATLEASRRAEFLILQTGMTAFGKAYYKNHSDLVPNLVTKLEALRDEYMRYATEKCSSVLYEYQSAVETITDILLEKGKIKAEEIWEIYKSAPRLAQPSVSPVDEYGALIYAGRWGIHGISLSGRVTFAPGNVGFSTFGAPRPTETQIVSDETWKLVDHIWDKKLEDIREDASRVIEEEKQKPQLLMASHFL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0528 853 Pfam ATPase family associated with various cellular activities (AAA) 350 484 IPR003959 GO:0005524|GO:0016887
Lan15g0528 853 SUPERFAMILY FtsH protease domain-like 574 755 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Lan15g0528 853 Pfam AAA+ lid domain 511 554 IPR041569 -
Lan15g0528 853 ProSitePatterns AAA-protein family signature. 455 473 IPR003960 GO:0005524|GO:0016887
Lan15g0528 853 Gene3D - 486 566 - -
Lan15g0528 853 Gene3D Peptidase M41 568 755 IPR037219 GO:0004176|GO:0004222|GO:0005524|GO:0006508
Lan15g0528 853 Coils Coil 84 112 - -
Lan15g0528 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 306 559 IPR027417 -
Lan15g0528 853 CDD AAA 317 485 - -
Lan15g0528 853 Gene3D - 295 484 IPR027417 -
Lan15g0528 853 PANTHER INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 4, CHLOROPLASTIC-RELATED 46 822 - -
Lan15g0528 853 SMART AAA_5 346 487 IPR003593 -
Lan15g0528 853 PANTHER METALLOPROTEASE M41 FTSH 46 822 - -
Lan15g0528 853 Coils Coil 503 523 - -
Lan15g0528 853 MobiDBLite consensus disorder prediction 66 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0528 Lan-Chr15 12323040 12331078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0528 147 594 Miscellaneous Gene Families AT3G47060 38.022 2.69e-68 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0528 - - gmx:100804743 1466.44