Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0482 ATGCATTCATTCAGCAACCAAAAAAACCATAACGAACCCGGTTCAGCTCCACCTCCTCGAACCGACCGGTCCAACTCATCCCTATCATCAGAGTTACACCACCACCACCACCACCACTACATGCTGCCGGCAAAACCTCCCTCCTTCCGATCCCTCTCCTCATGTAGCCGCAGCACCCGCGGCACCACCCCCTCCTCCTCCTCCTCCTCCCAGCAGGTGCAGCGTTCCGTTTCCGCCAGGTTCAATCGACAGAACACTACACGCGGTGAGGTTGTGCTCAATGATGTAGTTGGGAATGGGATATCTGGGATATTGTATAAATGGGTTAATTATGGACGAGGGTGGCGCCCACGGTGGTTTATTCTGCACGACGGTGTTCTTTCTTATTATAAGATTCATGGACCTGATAAGATTGTGCTTAACCGTGAAGTTGAAAATGGGTTCAAGGTTATCGGAGAAGAGTCTCGCCGCCGTATCGCTGGCCAACGTCATGTTCTTTCCCGTCACTGTAAACCCGTCAGCGAAATCCACCTCATGGTTTGTTCCATAAGACAGAACAAGACAGATGAGAAGAGATTTTCCATATATACAGGCACAAAGAAGAGGCTGCATTTGAGGGCAGAGAGTGGAGAGGACAGGACAACATGGTTGGGGGCAATGTTAGCGGTAAAGGACATGTATCCTCGTTTACCCAATGCTGAGATTATGGCTCCTGTCGTATCTGTCGTTATTTCAACTGACAAGTTGAAACAACGACTTTTACAAGAGGGTTTGAATGAGACAGCTATTAAGGAAAGTGAAGATATAATGAGAGCTGAACTCTCTACATTGCATAAGTATATTGTTGCCCTCAAACAGAAGCAATTTATGCTAATTGATGCACTGCGCCATTTGGAGACGGATAAGGTTGACTTGGAGAACACAGTTGTTGAAGACCAAATTCAGTCGAAGGAAGAAGGGGATTCCTTTCTATCAACACATGAAAAATATAGTGCAGATGGAAGTGCTACAGACTCTTCTGATGAGCATGATAGGCATGACCATTCTGATGATGAAGATGCATTCTTTGACACATCTGATATTCTTTCAACATGTTCATCTGACCACATGAGGTCCTGCCATGAATCTGAAATTGATGACACTAATCCAAATGGTATATGTGATTCAATTTCGGTCATCACGCCTGTCGGATCTTACTATCCGAATATTAAGAGAAGAAATAAGTTGCCTGACCCTGTTGAGAAAGAGAATGGAATCAGTCTTTGGTCAATAATAAAAGATAACATTGGGAAGGATCTTACAAAAGTGTGTCTTCCAGTTTACTTCAATGAGCCTCTCTCCTCATTGCAGAAATGTTGTGAAGATGTAGAGTACTCTTACATTCTAGACCAAGCTTATGAATGGGGTAAAAGGGGTAACAGTTTTATGAGGATGCTGCATGTAGCTGCATTTGCAGTTTCAGGGTATGCTAGCACTAGGGGTAGAAGTTGCAAACCATTTAATCCATTGTTGGGGGAGACGTATGAGGCAGATTATCCCGACAAAGGCATTCGGTTTATCTCAGAGAAGGTCAGTCATCACCCGATGATTGTTGCATGCCATTGTGAGGGGAATGGCTGGAAATTTTGGGGTGACAGCAATTTAAAAAGTAAATTTTGGGGTCGTTCAATTCAGCTTGATCCGGTTGGTGTTTTGACTCTGGAATTTGATGATGGAGAAGTCTTTTATTGGAGTAAAGTAACAACATCCATTTACAACCTCATTTTAGGGAAGCTCTACTGCGAGCATTATGGTACAATGCGGATAGAGGGGAACCGTGAGCATACATGCAAGATTAAGTTCAAGGAGCAGTCAATCATAGATAGAAACCCTCACCAGATTCATGGCATAGTGGAAGATAAGAAAGGTAAAAATGTGGGAACCATATTTGGGAAATGGGATGAGAGCTTGCATTACGTAATCGGAGGGAATTCGGGTAAAGGAAAAGGGTCAAATGTGTCATCAAAACCAAATCTTCTATGGAAGCGAAGCCCTCCACCTGAGCACCAGACAAGATATAACCTTACACAGTTTGCTATCACACTAAATGAAATCACACCTGATCTCAAGGAGAAGTTGCCACCAACCGATTCGAGGCTAAGACCTGATCAAAGGTGTCTGGAGAATGGAGAGTATGAAATGGCCAATGCTGAGAAGTTGCGGCTGGAACAAAGACAGCGACAGGCGCGAAATATGCAAGAGAAGGGTTGGAAACCAAGGTGGTTTGCTAAGGATAAAGGTGACAACACTTACCACTATATTGGTGGATATTGGGAGACTAGGGATAAGGGGAATTGGGAATCTTGTCCTAACATTTTTGGCCAACACTCAACTGATAATGATCTTAACCCATCTCCATAA 2400 0.4396 MHSFSNQKNHNEPGSAPPPRTDRSNSSLSSELHHHHHHHYMLPAKPPSFRSLSSCSRSTRGTTPSSSSSSQQVQRSVSARFNRQNTTRGEVVLNDVVGNGISGILYKWVNYGRGWRPRWFILHDGVLSYYKIHGPDKIVLNREVENGFKVIGEESRRRIAGQRHVLSRHCKPVSEIHLMVCSIRQNKTDEKRFSIYTGTKKRLHLRAESGEDRTTWLGAMLAVKDMYPRLPNAEIMAPVVSVVISTDKLKQRLLQEGLNETAIKESEDIMRAELSTLHKYIVALKQKQFMLIDALRHLETDKVDLENTVVEDQIQSKEEGDSFLSTHEKYSADGSATDSSDEHDRHDHSDDEDAFFDTSDILSTCSSDHMRSCHESEIDDTNPNGICDSISVITPVGSYYPNIKRRNKLPDPVEKENGISLWSIIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEDVEYSYILDQAYEWGKRGNSFMRMLHVAAFAVSGYASTRGRSCKPFNPLLGETYEADYPDKGIRFISEKVSHHPMIVACHCEGNGWKFWGDSNLKSKFWGRSIQLDPVGVLTLEFDDGEVFYWSKVTTSIYNLILGKLYCEHYGTMRIEGNREHTCKIKFKEQSIIDRNPHQIHGIVEDKKGKNVGTIFGKWDESLHYVIGGNSGKGKGSNVSSKPNLLWKRSPPPEHQTRYNLTQFAITLNEITPDLKEKLPPTDSRLRPDQRCLENGEYEMANAEKLRLEQRQRQARNMQEKGWKPRWFAKDKGDNTYHYIGGYWETRDKGNWESCPNIFGQHSTDNDLNPSP* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0482 799 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 38 791 IPR000648 GO:0008289
Lan15g0482 799 Pfam Oxysterol-binding protein 420 774 IPR000648 GO:0008289
Lan15g0482 799 SMART PH_update 99 227 IPR001849 -
Lan15g0482 799 ProSiteProfiles PH domain profile. 98 225 IPR001849 -
Lan15g0482 799 MobiDBLite consensus disorder prediction 659 679 - -
Lan15g0482 799 Coils Coil 725 748 - -
Lan15g0482 799 MobiDBLite consensus disorder prediction 1 82 - -
Lan15g0482 799 SUPERFAMILY Oxysterol-binding protein-like 415 788 IPR037239 -
Lan15g0482 799 MobiDBLite consensus disorder prediction 334 354 - -
Lan15g0482 799 Gene3D - 506 676 - -
Lan15g0482 799 Gene3D - 99 227 IPR011993 -
Lan15g0482 799 MobiDBLite consensus disorder prediction 1 26 - -
Lan15g0482 799 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 38 791 - -
Lan15g0482 799 MobiDBLite consensus disorder prediction 49 82 - -
Lan15g0482 799 SUPERFAMILY PH domain-like 101 231 - -
Lan15g0482 799 MobiDBLite consensus disorder prediction 331 354 - -
Lan15g0482 799 Pfam Pleckstrin homology domain 106 220 - -
Lan15g0482 799 Gene3D - 717 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0482 Lan-Chr15 11302111 11309197 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0482 K20456 - gmx:100781218 1166.76