Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0464 ATGAAGAGAAAGAGAGAAGGAGAAGCGGGAATGGATATAGTGTGGCAGACCCCAGCGAATCCCCCGCACCCTCAAGACTACATTTTTCGAAACGGGATACGATACGTTAAACCATACTACTTCGAGTTTATAGCTCATGTTAAAAATCGATGGGCAGGGAAAACCATTGTTGATTTGTTCGCTGATGAGTTTAAGGGTCGACCTTATGAATATTATGTTAGTGCAGTAAAATGTGGAAGGATTCAAGTTGATGGTGAGATGGTGCCGGTTTCATACATGGTTAAATCATCTCAAAAGATAAGCCATTTTGTACACAGGCATGAACCACCTGTGATGGCTTGCGATGTTCCTATTCTTCAAAAAGAACCGGATGTGCTAACAGTTTGTAAGCCAGCATCTGTCCCTGTTCATCCATGTGGTCAATATCGTAAGAACACTGTTGTTGGCATCCTTGAAGCAGAGCATGGGCTAGCACCTCTTTTTCCAATTCATCGACTGGATCGCCTTGTCTCAGGACTTCTCATTTTGGCCAGAAATGCTGCTAAAGCTGATATGTTTCGGCAGCAGATTGAAGGTGGCTTAGTCAAGAAACAATATATAGCAAAAGTAGTTGGGGAATTTCCCGAGGATGAGCTAACTGTTGATGCCAATATAGACTACAATGCTCGAGAAGGAAGGAGCACAGCAGAGGTCAGAGACTCTGCCAAGGGGAAGACTGCCTCTACGAAATTTAGTCGGATTAGTTCGAATGGTACTCAAAGTATTGTTTTATGTGAACCAGTCACTGGTCGTACTCATCAGATACGTGTTCACTTACAGCATTTGGGACACCCAATAGCCAATGACATGCTCTACATCTCAGACCAGACTGTTGATCGATCTATTAAAGGGTCAAGTGCCGATAGATCAGCTCGCATGTCTGATGCTTCCCTGCCATCAAATTTTGATGAAAAAGTGATCAATGAATGTGAAGAAAATTCAGATTCGGATTTAAGCATTGATCCCATGTGTACAAACTGTCCAAATTTGGCACCCAAAGGATATGATGATGATGAAGAAGGTCTATGGCTACATTGTTTTCGGTACTGTGGACCTGGATGGGAGTATGAATGCCCATATCCTGATTGGGCCAAACTTAGCTAG 1143 0.4304 MKRKREGEAGMDIVWQTPANPPHPQDYIFRNGIRYVKPYYFEFIAHVKNRWAGKTIVDLFADEFKGRPYEYYVSAVKCGRIQVDGEMVPVSYMVKSSQKISHFVHRHEPPVMACDVPILQKEPDVLTVCKPASVPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARNAAKADMFRQQIEGGLVKKQYIAKVVGEFPEDELTVDANIDYNAREGRSTAEVRDSAKGKTASTKFSRISSNGTQSIVLCEPVTGRTHQIRVHLQHLGHPIANDMLYISDQTVDRSIKGSSADRSARMSDASLPSNFDEKVINECEENSDSDLSIDPMCTNCPNLAPKGYDDDEEGLWLHCFRYCGPGWEYECPYPDWAKLS* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0464 380 CDD PseudoU_synth_ScRIB2 101 378 - -
Lan15g0464 380 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 12 379 - -
Lan15g0464 380 TIGRFAM rluA_subfam: pseudouridine synthase, RluA family 50 295 IPR006225 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lan15g0464 380 ProSitePatterns Rlu family of pseudouridine synthase signature. 163 177 IPR006224 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lan15g0464 380 SUPERFAMILY Pseudouridine synthase 108 377 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lan15g0464 380 Pfam RNA pseudouridylate synthase 125 274 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Lan15g0464 380 Gene3D Pseudouridine synthase 109 360 - -
Lan15g0464 380 PANTHER PSEUDOURIDINE SYNTHASE 12 379 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0464 K15454 - gmx:100811500 706.827