Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0452 ATGAAAAGGCCATTGAAACACCTTCACAAACGTACCACCGACAAACATGATTTCTTCGATGCTTTATTTGATGATCTCGTTGTCTTCATTCTCTCAAAACTCAGTTCCACTGCTTCTTCTCCTTCTCAATTCATTAACATTCTCTCCACATGCAAGAGGCTGAACCGTTTGGGTCTTCATCGTCTGGTACTTTCAAAAGCTGGTCCAAAAGTGTTTTCCATTAAGGCCAAAAATTGGTCTGAACATGTTCATCGTTTTTTTAAACTCTGTGTTAACGCTGGAAACCTCAACGCTTGTTACACTCTTGGAATGATCCGATTTTATTGTCTTAAAAACAGAGCGAGTGGTCTTTCTCTAATGGCGAAGGCGGCGATGAAATCTCACGCGCAGGCGTTGTACTCTTTGGCAGTAATACAGTTCAACGGAAGCGGAGGAACGAAGCGTGATAAGGACTTAAGAGCCGGCGTTGCACTCTGCGCACGCGCGTCGCTTCTCGGCCACATCGACGCGCTTCGCGAGTTAGGTCACTGCTTGCAAGACGGTTACGGCGTGAAGCAGAACGTCTCAGAGGGTCGTCGTTTACTAGTCAAGGCCAACGCGCTTGAGCTCGCGTTCGTTATACGCGCAGTCACCAGCGCGTCTCCATCACGATCCCTCTCAACTTCCTCGGTGCTGACGTGGCGCGCGGTGGATTACACGGTGTGTCCGTTGCTGAGTGATTATGGGTACAACGTGGCGGTGCCAGTGGTGCAACCCGTTAACTGGTTTATGAGGGAGTGGTTTGAAACGGGCCCGGGTCGGGTTGAAATGGTTGCGGGTTTGAGACTATGTGCGCATATTGGGTGTGGTCGACCCGAGACCCGGGCCCACGAGTTTCGGAGGTGTTCGGTTTGTGGGAAAGTGAATTATTGCTCGCGTGGGTGTCAAGCGCTGGATTGGAAATTGCGGCATAAGATGGAGTGCTCGCCGGAGGAGGTGGTGGGGGAAGACAATAACGGTGGTGCTGGCGGTGGTGGTGTGGATTTAGGTAATGACGACGTCGTTTAA 1047 0.5081 MKRPLKHLHKRTTDKHDFFDALFDDLVVFILSKLSSTASSPSQFINILSTCKRLNRLGLHRLVLSKAGPKVFSIKAKNWSEHVHRFFKLCVNAGNLNACYTLGMIRFYCLKNRASGLSLMAKAAMKSHAQALYSLAVIQFNGSGGTKRDKDLRAGVALCARASLLGHIDALRELGHCLQDGYGVKQNVSEGRRLLVKANALELAFVIRAVTSASPSRSLSTSSVLTWRAVDYTVCPLLSDYGYNVAVPVVQPVNWFMREWFETGPGRVEMVAGLRLCAHIGCGRPETRAHEFRRCSVCGKVNYCSRGCQALDWKLRHKMECSPEEVVGEDNNGGAGGGGVDLGNDDVV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0452 348 PANTHER HCP FAMILY PROTEIN WITH MYND-TYPE ZINC FINGER PROTEIN 6 334 - -
Lan15g0452 348 SUPERFAMILY HIT/MYND zinc finger-like 274 323 - -
Lan15g0452 348 Gene3D Tetratricopeptide repeat domain 73 213 IPR011990 GO:0005515
Lan15g0452 348 Gene3D - 271 325 - -
Lan15g0452 348 SUPERFAMILY HCP-like 84 201 - -
Lan15g0452 348 Pfam Sel1 repeat 169 198 IPR006597 -
Lan15g0452 348 Pfam Sel1 repeat 129 167 IPR006597 -
Lan15g0452 348 Pfam MYND finger 282 321 IPR002893 -
Lan15g0452 348 PANTHER MYND DOMAIN-CONTAINING 6 334 IPR044508 -
Lan15g0452 348 ProSiteProfiles Zinc finger MYND-type profile. 279 321 IPR002893 -
Lan15g0452 348 MobiDBLite consensus disorder prediction 325 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0452 Lan-Chr15 10491511 10493206 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0452 - - adu:107463542 501.13