Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0314 ATGGCGAGCACAGTGGAGAAGGAAAGTGGTGCTAGCGAAGAAGTCTTCTCTTTGGAGCTACCTGCTCCACTTGGTTGGAAGAAGAAGTTCTCCCCAAAGAAGGCTGGGACCCCAAAGAAAAATGAAATTGTGTTCACTGCACCAACAGGAGAGGAGATCAGTAATAGGAAGCAGCTGGAACAGTATCTGAAAGCACACCCTGGTGGTCCAGCTGTATCAGAATTTGATTGGGGGAGTGGTGAGACCCCAAGAAGATCGGCAAGGATCAGTGAAAAAGTCAAGGCAGCTCCTCGACCAGAATGTGAGCCCCTGATGAAACGTGGAAAAAGATCACCAGCTTCGAAAAAAGAAACTTCTGGGGAAGAAAAGGAGGAGGCAAAGGATGTGCAAATGCAAGAAGCTGATGACTCTAAGGATGAGAAAGATACAGCAGAGGAAAAGAATATTGAGAAGGAAAATCAAGATGACAAGAGAGGGGAGGATACAGATGTCAAAGAATCAACTCATTCTGGAGAAGCTAAAGCTGGAGAAAATGTGCAGGTACTGAATGACGAAGGAAAATTGGAGAGTGCTGAGGTTTCTGAGGTTTCTCAAAATAAAGATGAAGAAAAAATTGGGCAACCACAGGAAGAGGCAAACAAAGATGGTGGATCTGGTGAACCACAGAAATCAGAAACAGCGCCTGCTGCTGAGGCTAAGGTTGAATTGGTAGGAGAGAATAAAGAGGAACAAAACAAAAGTACTAATGAATCTGAAGGAGAAATCAAGGAAAAAGAAGGAACAAAAGTGAATAGTGAAGAACATCACAAGGTTGATGAGATAAACAAGAGGACTGAAGCAGAGTTGGCAGTTAACGGTAACCATGGGAGTTGA 873 0.4399 MASTVEKESGASEEVFSLELPAPLGWKKKFSPKKAGTPKKNEIVFTAPTGEEISNRKQLEQYLKAHPGGPAVSEFDWGSGETPRRSARISEKVKAAPRPECEPLMKRGKRSPASKKETSGEEKEEAKDVQMQEADDSKDEKDTAEEKNIEKENQDDKRGEDTDVKESTHSGEAKAGENVQVLNDEGKLESAEVSEVSQNKDEEKIGQPQEEANKDGGSGEPQKSETAPAAEAKVELVGENKEEQNKSTNESEGEIKEKEGTKVNSEEHHKVDEINKRTEAELAVNGNHGS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0314 290 Pfam Methyl-CpG binding domain 19 81 IPR001739 GO:0003677
Lan15g0314 290 Coils Coil 127 154 - -
Lan15g0314 290 MobiDBLite consensus disorder prediction 85 172 - -
Lan15g0314 290 MobiDBLite consensus disorder prediction 235 279 - -
Lan15g0314 290 SUPERFAMILY DNA-binding domain 12 104 IPR016177 GO:0003677
Lan15g0314 290 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 1 289 - -
Lan15g0314 290 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 12 82 IPR001739 GO:0003677
Lan15g0314 290 MobiDBLite consensus disorder prediction 188 210 - -
Lan15g0314 290 MobiDBLite consensus disorder prediction 65 290 - -
Lan15g0314 290 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 289 IPR039622 -
Lan15g0314 290 Gene3D - 17 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0314 Lan-Chr15 4555594 4564969 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0314 - - gmx:100800976 374.785