Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0238 ATGCCATCCCTAAAAATGAAGAGCAAAGTAAGCACGAGCTGTTTAACAGAAACACAGGATCTTCACGTGTGTCCGAAATCAAAAATAATATCCAAAAATCCATGCTCTAAAATCATGATTTCTGCTCAAGTGGCAGAAATAGACACTACTGTTCAATGCTGCCAAGACGTTTCCGCAAGGACACTGCCCAAAGACATTGCAAGTGATCAGTCTATTGACAATAAAGTATTCCTGGATAATGACAAATCTGAGTCCCAGCACCAATTTTCCGTCTGTTCCTCCGTCATGGGAAGAATGGAACTAACCAATCCATGTACAGCAAACTTAGAAACAATTTTTTCTCCTGCTTTTGAGCCAATTGAAGTTCATTCACAACATCATACCGAAAAAGATGCAGGCCGCATTGGTGATACTGACATGCTGGGAGTTGGAGTTGATGAGGGAAGAAGCATATGTGGCTATGAAACATGTGATGTGTCAGACTTCTACATTTCTGACATGATCATCACAAGCTTACCCTTTGGTGGAAATGCCTTCGATGATGATATCATTGCAACCAGTTGCTTATCTGATTATGGTTCGGCTGAGCCGTCCATGTTTAATGCATGTGAACAGTACATGATCTTGCCTGCTCTTGAAGATGATGGTAAAGTTAGCAGGACTTCTGATATCGTATCATATGAAGAAGCTGTGCTGGTTCAAGAAGATGCTAGCCTGTATTCGGCTATTGGTCAGATAAGATCCTACAACCCGGAGTCTGATGTTAAAAATGACTTGGATAAGGCAGAGTCCTTTGATCCGCAGTCATTTATCAAGAATTCACCAGAATTATCGGAAGTAGAACTAAATGGCCAGAACGCGTTGATTCCTAAGCAATCTCCAAGAAGAAAGTCAGTAACCCTAGTTCTTGATTTAGATGAGACGCTTGTTCATTCTACATTGGAACATTGTGATGATGCTGATTTTACATTTACTGTATTCTTCAACATGAAAGAGTATACAGTATATGTAAAACAGAGGCCTCATCTCCACACATTCTTCGAGAGAGTATCAGAGATGTTTGAAGTAGTTATTTTTACTGCCAGCCAAAGCATATATGCAAATCAACTTCTTGATGTATTGGATCCTGATGAAAGATTTATTTCTCGCCGGGTGTATCGAGAATCATGCATTTTTTCAGATGGAAATTACACAAAAGATCTTACTGTATTAGGTGTTGATCTTGCAAAAGTTGCCATAATTGATAATTCACCCCAGGTTTTTCGGTTGCAAGTGAATAATGGTATTCCAATAAAGAGTTGGTTTGATGATCCATTAGATTGTGAATTGATGTCATTACTTCCCTTTCTAGAGACCTTGGCTGATGCTGATGATGTCCGTCCTATCATTGCTAAGAGATATGGTAACAAAGAATAA 1416 0.3927 MPSLKMKSKVSTSCLTETQDLHVCPKSKIISKNPCSKIMISAQVAEIDTTVQCCQDVSARTLPKDIASDQSIDNKVFLDNDKSESQHQFSVCSSVMGRMELTNPCTANLETIFSPAFEPIEVHSQHHTEKDAGRIGDTDMLGVGVDEGRSICGYETCDVSDFYISDMIITSLPFGGNAFDDDIIATSCLSDYGSAEPSMFNACEQYMILPALEDDGKVSRTSDIVSYEEAVLVQEDASLYSAIGQIRSYNPESDVKNDLDKAESFDPQSFIKNSPELSEVELNGQNALIPKQSPRRKSVTLVLDLDETLVHSTLEHCDDADFTFTVFFNMKEYTVYVKQRPHLHTFFERVSEMFEVVIFTASQSIYANQLLDVLDPDERFISRRVYRESCIFSDGNYTKDLTVLGVDLAKVAIIDNSPQVFRLQVNNGIPIKSWFDDPLDCELMSLLPFLETLADADDVRPIIAKRYGNKE* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0238 471 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 299 463 IPR011948 GO:0016791
Lan15g0238 471 ProSiteProfiles FCP1 homology domain profile. 294 453 IPR004274 -
Lan15g0238 471 SMART forpap2 297 441 IPR004274 -
Lan15g0238 471 CDD HAD_FCP1-like 300 431 - -
Lan15g0238 471 PANTHER SCP1-LIKE SMALL PHOSPHATASE 4-RELATED 1 469 - -
Lan15g0238 471 Gene3D - 284 467 IPR023214 -
Lan15g0238 471 SUPERFAMILY HAD-like 288 464 IPR036412 -
Lan15g0238 471 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 469 - -
Lan15g0238 471 Pfam NLI interacting factor-like phosphatase 300 460 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0238 Lan-Chr15 2674000 2680973 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0238 K17616 - gmx:100799803 811.216