Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0234 ATGGATCATCACGAGGAAGAATGTCACATCGAAGGTGAAAGGACTAGCAAACAAGATGATGAGGAAGCTGTTGCTCGCCTTGAGGAATTAAAAAAATCAATTGAGGCTAAGATGGCTTTACGTCAAAGCAATTTGAACCCTGAGAGGCCTGATGCAGGATTTTTAAGGACATTGGATTCCAGCATTAAGCGCAACACTGCAGTTATTAAGAAACTGAAGCAGATAAATGAAGAGCAGCGTGATGCACTGATGGACGAGCTACGAGGTGTCAACTTAAGCAAATTTGTCAGTGAAGCTGTGGCAGCTATATGTGACGCCAAGCTTAGAAGTTCAGATATACAATCAGCAGTTCAGATCTGCTCTTTGCTTCATCAAAGGTACAAGGACTTCGTACCAAGCCTGATTCAAGGGCTTCTCAAAGTCTTCTCTCCTGGAAAATCTGGTGATGAATCTGATGCAGATAAAAACTTGAAGGCAATGAAGAAGCGCAGTAGTTTGAAACTTCTGTTAGAACTTTATTTTGTCGGGGTTATTGAAGATGGTGGCATTTTTATCAATATCATAAAGGATCTTACCAGCGCAGAACAGCTTAAAGATCGGGATGCTACACAAACAAGTTTGACCCTACTTTCAAGCTTTGCTCGGCAAGGGAGAATTTTTATAGGACTTTCTGTTACTGGGCCAGAAATTCACGAGGAGTTTTTTAAAGGTCTTAGCATCACGGCAGATCAAAAGAAAGTTATTCGGAAAGCGTGTTATTCATTTTATGATACCGCAGCTGATATACTTCAGTCTGAGCATTCTTCACTTCGACTAATGGAGCATGAAAATTCTAAAATTCTTAATGCAAAAGGAGAGCTCAGTGACGAAAATATTGCTTCATATGAAAAGCTTCGTAAATCCTATGACCAGTTGTACCGTAATGTCTCATCAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAACAGAGCCGAAAGTCAGTGAGCAATCTGCGAAGAGTCAAGACCAACCAACTGAAATTGTACTTGAATCAGACAAAGATCTACTAGCCACCTATGAAAGTGGAGAGGCCTCTACAGACTCTAGTACTTTGCCAGAGGGAGAAAGCACGGAAAAAGTGAAGGATAAAGAAGAAAAAGAAAAGTCTAAAGAATTGGAGAAAGAAAAGTCTAAAGAGTTAGACAGAGAGAAGGAAAAAGAAAAGGACATTGACAAAAAAGGGGAAAATGAAAAAGATAAACTCAGAACTCTTGAAGGGACAAATTTTGATGCTTTATTGCAGAGGCTTCCGGGTTGTGTCAGCCGAGACCTTATAGATCAATTGACTGTAGAATTCTGTTACCTAAATTCAAAATCAAATCGGAAAAAGCTTGTGAGGGCTTTGTTCAATGTACCGAGGACATCTCTGGAGCTTCTACCATATTACTCACGCATGGTTGCCACACTTTCAACTTGTATGAAGGATGTCAATACGATTCTCTTGCAGATGTTGGAGGAGGAGTTCAATTTCTTAATAAATAAAAAAGACCAGATGAACATTGAGACTAAGATAAGGAATATCAGGTTCATCGGAGAACTTTGCAAGTTCAAAATTGCACCTGCTAGCTTTGTTTTCAGTTGTTTGAAGGCCTGTTTAGATGATTTTTCTCATCACAACATTGATGTAGCTTGCAATCTTCTTGAAACATGTGGCCGTTTTCTATATCGGTCTCCAGAAACTACTATACGCATGGCTAACATGTTGGAAATACTGATGCGCTTAAAAAATGTGAAAAACTTGGATCCCAGACACAGCACTTCAGTGGAGAATGCATACTACCTTTGCAAGCCACCGGAAAGATCTGCACGGGTAGCTAAAGTTCGCCCTCCATTGCATCAGTATATTAGAAAATTACTTTTCTCTGATCTTGATAAGTCTACCATCGAGCATGTGCTGAGGCAACTTCGTAAGTTACCATGGAGTGAATGTGAACCATATCTTTTGAAATGCTTCATGAAGGTCCACAAAGGGAAATATGGTCATATCCACTTGCTTGCTTCTCTTGCTGCTGGGTTAAGTCGCTATCATGATGAGTTTGCAGTGGCTATTGTTGACGAGGTTTTGGAGGAGATTAGACTTGGGCTTGAGTTAAATGACTATGGGATGCAGCAAAGACGCATTGCCTACATGCGGTTCTTAGGGGAGCTTTACAACTATGAGCATGTAGATTCATCTGTTATTTTTGAGACATTATATCTCATTCTTATATATGGTCACGGGACACCAGAGCAAGATGTACTGGATCCACCTGAAGATTGTTTTCGTATAAGGTTGAATGTTACCTTACTTGAAACTTGTGGGCATTACTTTGACCGTGGCTCTTCTAAGAGGAAACTTGATCGATTCCTTATACACTTCCAGAGGTATATTTTAAGCAAAGGTGCATTGCCCCTAGACGTCGAATTTGACTTGCAGGATATGTTTGCAGACTTGCGCCCCAATATGGTTCGATACACATCCATTGAGGAAGTGAATGCAGCTCTAGTAGAACTTGAGGAACATGATCGTACAGTTTCTGAGAAATCTCCACGTAGTTCCAAGTTTGCAGTAGGTGATGGACAGAGCATTGATAATGGTGCAGAGGAAAATGGAGTGCAAGATGATGCTAATGATAGTGAGACAGATTCACAGAGTGACACGGTTGATGTAGAGGGTCACGACGACGAAGAGTTGGATGAGGAGAATCACGATGATGGTTGTGAGACCGAGGATGATGATGATGATGATGGACCTGGACCTGCTTCTGACTATGAAGATGAAGTCCATGTGAGACACAAGATGACAGAGGTGGACCCTCTGGAAGAAGCCAATTTTGATCAGGAGCTCAAAGCTTTAGTAAAGGAGAGTATGGAAGAGCGAAGCCGGGATCTGCGAGGACGTCCTACACTAAACATGATGATTCCAATGAATGTACTTGAGGGATCCACCAAGGATCATCATGGGAAAGGAATTGGTGGGGAAAGTGGTGATGAGGCGTTGGATGATGAGAGTGGTGGAAACAAAGAGGTTCAGGTGAGAGTTCTTGTGAAGCGTGGGAACAAGCAACAAACAAAGCAGATGTTCATCCCACAGAATTCCTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCTGAGCTTCAAGAGAAAGAGGACATTAAGAGGCGTGTTTTGGAGTACAATGACAGAGAAGAGGAGGAGCTTAATGGGTTAGGGACCCAACCAAGTAACTGGCTGCAAAGTGGAGGTAGCAAAGCAGGTGGCCGTGGACACACTTTGGAAGGAACCAGTGGCAGGGGTGGTGGATCACGACATCGACAGCATAATTATCATACTGGCAGTGGACTCTACTATAGCAGAAGAAGGTGA 3387 0.4207 MDHHEEECHIEGERTSKQDDEEAVARLEELKKSIEAKMALRQSNLNPERPDAGFLRTLDSSIKRNTAVIKKLKQINEEQRDALMDELRGVNLSKFVSEAVAAICDAKLRSSDIQSAVQICSLLHQRYKDFVPSLIQGLLKVFSPGKSGDESDADKNLKAMKKRSSLKLLLELYFVGVIEDGGIFINIIKDLTSAEQLKDRDATQTSLTLLSSFARQGRIFIGLSVTGPEIHEEFFKGLSITADQKKVIRKACYSFYDTAADILQSEHSSLRLMEHENSKILNAKGELSDENIASYEKLRKSYDQLYRNVSSAFVPAVLLGETEPKVSEQSAKSQDQPTEIVLESDKDLLATYESGEASTDSSTLPEGESTEKVKDKEEKEKSKELEKEKSKELDREKEKEKDIDKKGENEKDKLRTLEGTNFDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVNTILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPASFVFSCLKACLDDFSHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTSVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWSECEPYLLKCFMKVHKGKYGHIHLLASLAAGLSRYHDEFAVAIVDEVLEEIRLGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIYGHGTPEQDVLDPPEDCFRIRLNVTLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDVEFDLQDMFADLRPNMVRYTSIEEVNAALVELEEHDRTVSEKSPRSSKFAVGDGQSIDNGAEENGVQDDANDSETDSQSDTVDVEGHDDEELDEENHDDGCETEDDDDDDGPGPASDYEDEVHVRHKMTEVDPLEEANFDQELKALVKESMEERSRDLRGRPTLNMMIPMNVLEGSTKDHHGKGIGGESGDEALDDESGGNKEVQVRVLVKRGNKQQTKQMFIPQNSSLVQSTKQKEAAELQEKEDIKRRVLEYNDREEEELNGLGTQPSNWLQSGGSKAGGRGHTLEGTSGRGGGSRHRQHNYHTGSGLYYSRRR* 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0234 1128 Coils Coil 17 37 - -
Lan15g0234 1128 SUPERFAMILY ARM repeat 621 846 IPR016024 -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 847 934 - -
Lan15g0234 1128 Pfam Up-frameshift suppressor 2 932 1065 IPR007193 -
Lan15g0234 1128 SUPERFAMILY ARM repeat 420 614 IPR016024 -
Lan15g0234 1128 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 1 311 IPR039762 GO:0000184
Lan15g0234 1128 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 312 1125 IPR039762 GO:0000184
Lan15g0234 1128 PANTHER - 1 311 - -
Lan15g0234 1128 PANTHER - 312 1125 - -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 367 404 - -
Lan15g0234 1128 Pfam MIF4G domain 426 610 IPR003890 GO:0003723|GO:0005515
Lan15g0234 1128 Pfam MIF4G domain 628 822 IPR003890 GO:0003723|GO:0005515
Lan15g0234 1128 Coils Coil 373 403 - -
Lan15g0234 1128 SMART if4_15 626 827 IPR003890 GO:0003723|GO:0005515
Lan15g0234 1128 SMART if4_15 62 284 IPR003890 GO:0003723|GO:0005515
Lan15g0234 1128 SMART if4_15 423 611 IPR003890 GO:0003723|GO:0005515
Lan15g0234 1128 MobiDBLite consensus disorder prediction 354 404 - -
Lan15g0234 1128 Coils Coil 494 514 - -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 877 927 - -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 1071 1128 - -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 986 1055 - -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 988 1014 - -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 1023 1048 - -
Lan15g0234 1128 MobiDBLite consensus disorder prediction 1 22 - -
Lan15g0234 1128 Gene3D - 14 324 - -
Lan15g0234 1128 Gene3D - 624 851 - -
Lan15g0234 1128 Gene3D - 370 623 - -
Lan15g0234 1128 SUPERFAMILY ARM repeat 78 196 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0234 Lan-Chr15 2617205 2637342 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0234 K14327 - gmx:100795746 1754.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0234 15 2617205 2637342 Lan14g0063 14 885312 906307 LSH