Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0227 ATGGAGGCAGAAGATAACAACAACAGAGTGAGAATCTTTGTAGGAGGTTTAGGAGAAACCGTAACCCCTCAAGATCTTCATCGATTATTTTCTTCTCTTGGAACCGTTCATGGGATTCAAACTATCCGAACCAAAGGTCGTAGCTTTGCTTACGTTGACTTCTTCCCTTCTCCCACCGATTCTAAATCTCTTTCCAAGCTTTTCAGCAAGTATAATGGCTGTTTGTGGAAGGGTGGAAAATTGAAACTTGAGAAGGCGAAAGAAAATTATCTGATACGTTTGAAAAAAGAATGGGAAGAAGCTGCTGCTGAGGAGGCTGTTAGTAGCCAGCCTGACACTAGTGACACTGCTAATGTTGATAGTGACAAAGTTCTTTCCTTGGAGGAGATGCACAAGAGAAAAGAGAGTTTGAAGACAAAGCAGCTGCACATTTTCTTTCCCGGGTTAAGAAAGGTGAAATCCATACCATTCAGTGGAACTGGCAAGCACAAATACAGTTTCCAGAATATTAAAGTGCCTTCAATGCCTGTACATTTCTGTGATTGTGAGGAGCATTGTAGTCCTTCTGGCACAGAAAGGGGAAAGCTATGTTTTGATCAGGTAGCAGCAGAAAGTGGCGGAATGAATGATGAAGAAATCAACGTAATGAATGCTGTGATGAACAAGCTACTGCAGAAAGAAAAGATTTCCAACACCAAGCATCTTGAAAAACAACAGGATTCTCTTGAATCACCTGATGCTGTACAATCCAATGAATCTGAGACTGGTAGCGGAACAGATGAAGATGACATCATAATTAATATTCAAACGAACAAAAGTAAGGCAGCTTTAACAAGTAGTGAGGAACTTGAAAGAATATTACAAAGTCAGGAATCATGGTTGAATAAAACAAGAATTGTTAAGGAAGAACCCAGCAAGACTATGTCTGAACTGAAGAAAAAGAATAATAACAATACTAGCAAGAAGAGAAAATCACTTCCGAAATTGGAAAAGGAAAGCAATGAGGGTGTGTCTACCACGCTTGGAGGCAAGAATAGTATGCAGACCCTTCCACATGAGGTGGGATCTGATGGGCAACCTAGTGATTCAGAAGATAGTAGCTTTGGGGAAACAACTAAAGTTTCTTGCTTTCAGAAGTCTTCATGGAAAGAACTTCTTGGTGCTGGAGGCAATACTGCTTTCAATGCCTCTCTCATACTGCCAAAGTTCGATTCTGGTAAAGGTCAACAGGGTTCTGATAGTCCGTCCACACCTTCATCTACTAAGAAAAAAGCAAAAAAGTCAAAAAGGGATGGATCCATTGTGAGCACACCTACCAATACACAAGTGATAAAAGAGCATGCTGAAGTTCGGCCTATTGATACACAAGAGGTAAACGAGTATGCTGAAGCTCAGCCTACTGAAAAAAATGTGTTACCAAATAAGGCAGACATAAAAAATCAAAACATGGAAAGGGATGGATACCTTTTGAGCAAACTTACCGATACAGAAGTGATAAAAGAGCTTGCTGAAGCTGAGCCTACCAGTACACAAGTGATAGAAGAGCATGCTGAAGCTGAGCCTACCGGTGCACAAGTGATAGAAGAGCATGCTGAAGCTGAGCCTACCAGTGCACAAGTGATAGAAGAGCATACTGAAGCTGAGCCTACTGACAAAAACGTGGTACCAAAGAAGACTGGTAGAGGTGCTTCATGGCTGCAAAAGGAATCATGGACACAACTGGTTCGGGAGAATAACAGCTCATTTAGCATTTCACAAATTTTGCCTGGCATCAGTTTCCCAGAACCAATGGCAACAGAGCCCATTGTGTACCCTGTCAATTCCAATGATGGAAAAAACAGTGGTGTAGCTAAGGATACCGTTAAGGAAGTTGTTATTGATGGGCTTAACTCGGGGGAGACTGTAACTGATAAGAGTCAGCATGTCTTTGCCACTGATATTACTTCTGCTCCAGTAGTGGAGGAAAAAAATGAAACAGAACCAATGGAAAGAACCACTGAAGAAACAACCCCAAAGGAAAGATCCACTGAAGTCGTTGAAGTAAGTGAAACTTGCTCGTTTATGAGAAATGCTGCTTCATTGAAAGAGTGGGCCAAAGCTAAGGCTGCTCTTAGTGGTTCCCTCAAACGAAAACGTGTTGAGAAGTAA 2148 0.4153 MEAEDNNNRVRIFVGGLGETVTPQDLHRLFSSLGTVHGIQTIRTKGRSFAYVDFFPSPTDSKSLSKLFSKYNGCLWKGGKLKLEKAKENYLIRLKKEWEEAAAEEAVSSQPDTSDTANVDSDKVLSLEEMHKRKESLKTKQLHIFFPGLRKVKSIPFSGTGKHKYSFQNIKVPSMPVHFCDCEEHCSPSGTERGKLCFDQVAAESGGMNDEEINVMNAVMNKLLQKEKISNTKHLEKQQDSLESPDAVQSNESETGSGTDEDDIIINIQTNKSKAALTSSEELERILQSQESWLNKTRIVKEEPSKTMSELKKKNNNNTSKKRKSLPKLEKESNEGVSTTLGGKNSMQTLPHEVGSDGQPSDSEDSSFGETTKVSCFQKSSWKELLGAGGNTAFNASLILPKFDSGKGQQGSDSPSTPSSTKKKAKKSKRDGSIVSTPTNTQVIKEHAEVRPIDTQEVNEYAEAQPTEKNVLPNKADIKNQNMERDGYLLSKLTDTEVIKELAEAEPTSTQVIEEHAEAEPTGAQVIEEHAEAEPTSAQVIEEHTEAEPTDKNVVPKKTGRGASWLQKESWTQLVRENNSSFSISQILPGISFPEPMATEPIVYPVNSNDGKNSGVAKDTVKEVVIDGLNSGETVTDKSQHVFATDITSAPVVEEKNETEPMERTTEETTPKERSTEVVEVSETCSFMRNAASLKEWAKAKAALSGSLKRKRVEK* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0227 715 CDD RRM_NOL8 11 87 IPR034138 -
Lan15g0227 715 Gene3D - 1 90 IPR012677 -
Lan15g0227 715 MobiDBLite consensus disorder prediction 407 421 - -
Lan15g0227 715 MobiDBLite consensus disorder prediction 332 372 - -
Lan15g0227 715 PANTHER TRANSCRIPTIONAL REGULATOR 2 712 - -
Lan15g0227 715 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 10 88 IPR000504 GO:0003723
Lan15g0227 715 MobiDBLite consensus disorder prediction 232 264 - -
Lan15g0227 715 MobiDBLite consensus disorder prediction 532 562 - -
Lan15g0227 715 MobiDBLite consensus disorder prediction 535 555 - -
Lan15g0227 715 SMART rrm1_1 11 84 IPR000504 GO:0003723
Lan15g0227 715 MobiDBLite consensus disorder prediction 656 679 - -
Lan15g0227 715 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 12 54 IPR000504 GO:0003723
Lan15g0227 715 MobiDBLite consensus disorder prediction 646 679 - -
Lan15g0227 715 MobiDBLite consensus disorder prediction 402 479 - -
Lan15g0227 715 MobiDBLite consensus disorder prediction 298 372 - -
Lan15g0227 715 MobiDBLite consensus disorder prediction 242 264 - -
Lan15g0227 715 SUPERFAMILY RNA-binding domain, RBD 4 90 IPR035979 GO:0003676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0227 - - lang:109328135 1299.65