Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0224 ATGAACATCTTCAAGAAGAAAACATCACCCAAAGAGGCTTTGAGGACAAGCAAGAGAGAAATGTCTGTTGCAACAAGAGGTATTGAAAGAGAGATAGCATCACTTCAGATGGAGGAGAAAAAATTGGTGGCAGAGATTAAGAAAGAAGCTAAAACTGGAAATGAGGCTGCCACTAGAATCTTGGCTCGTCAGCTTGTTAGGTTACGCCAACAGATAACTAATTTGCAGGGAAGTCGTGCTCAGATCCGGGGTGTAGCAACTCACACACAAGCTTTATATGCAAGCACATCAATCTCTACAGGCATGAAGGGTGCAACTAAAGCAATGGTGGCAATGAACAAACAAATGGCACCAGCAAAACAGGCTAAAGTGATTCAAGAATTCCAAAAGCAATCAGCACAACTGGACATGACGATTGAGATGATGTCAGAATCAATTGATGAAACTTTAGACAAAGATGAAGCCGAGGAAGAAACAGAAAACCTCACTAACCAGGTTCTTGATGAGATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGTCGAATTGGTACAAGGAATACTGAAAATGTTGCTCCAAGATCAGAATCTCAAGATGTTGAAGAACTTGAAAAGAGATTGGCTTCTCTTAGAAGAATATAG 651 0.4101 MNIFKKKTSPKEALRTSKREMSVATRGIEREIASLQMEEKKLVAEIKKEAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQAKVIQEFQKQSAQLDMTIEMMSESIDETLDKDEAEEETENLTNQVLDEIGVDIASQLSSAPKGRIGTRNTENVAPRSESQDVEELEKRLASLRRI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0224 216 Pfam Snf7 17 185 IPR005024 GO:0007034
Lan15g0224 216 PANTHER BNAA08G30490D PROTEIN 2 216 - -
Lan15g0224 216 MobiDBLite consensus disorder prediction 181 197 - -
Lan15g0224 216 MobiDBLite consensus disorder prediction 181 205 - -
Lan15g0224 216 Gene3D - 4 181 - -
Lan15g0224 216 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 216 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0224 Lan-Chr15 2469536 2475537 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0224 K12191 - gmx:100777179 385.185