Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0211 ATGTTTTCTTCTTCACTTTCCTTCCTTCATTCAACATCTCTCTCTTCGTCTTCCTTGTTATTCCCACCTTCAAATTCAACCCCAAATCCAAAGTTTCCCTTAAGTTTTGTGGTTGAAGCCAAAGCTAGTACCCGAAGAGAAGATAGAACTGCTCGCCATATCCGTATCAGGAAGAAGGTTGAAGGAACACCAGAAAGACCGAGATTGTCTGTCTTCCGATCCAACAAGCATCTCTCTGTCCAGGTGATTGATGACACCAATATGCACACTCTTGCTTCAGCTTCAACACTACAAAAGACAATTTTCGAAGAGTTCAACTACACCTCTGGTCCAACTATTGAAGTAGCAAAGAGGGTAGGTGAAATCATTGCAAAGTCATGTATCGAGAAAGGGATTAAAAAGGTCGCCTTTGACCGTGGTGGTTACCCATACCATGGCCGTGTTCAAGCACTTGCTGATGCGGCTCGTGAACATGGCCTGGAGTTCTAA 489 0.4397 MFSSSLSFLHSTSLSSSSLLFPPSNSTPNPKFPLSFVVEAKASTRREDRTARHIRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDTNMHTLASASTLQKTIFEEFNYTSGPTIEVAKRVGEIIAKSCIEKGIKKVAFDRGGYPYHGRVQALADAAREHGLEF* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0211 162 CDD Ribosomal_L18_L5e 56 160 - -
Lan15g0211 162 TIGRFAM L18_bact: ribosomal protein uL18 46 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Lan15g0211 162 Gene3D - 44 162 - -
Lan15g0211 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 13 162 - -
Lan15g0211 162 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 44 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lan15g0211 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 13 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Lan15g0211 162 Hamap 50S ribosomal protein L18 [rplR]. 44 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Lan15g0211 162 SUPERFAMILY Translational machinery components 45 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0211 Lan-Chr15 2259071 2261725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0211 K02881 - gmx:100306308 231.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0211 15 2259071 2261725 Lan14g0083 14 1173942 1176330 LSH