Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0166 ATGAGTTTCATCTTCGGAAAGAGAAAAACACCCGCAGAGCTTCTGCGGGAAAATAAGAGGATGTTGGACAAGTCAATTCGAGAAATAGAACGAGAGAGGCAAGGTTTACAAACACAAGAGAAGAAATTGATTTTGGAGATAAAGAAAAGTGCTAAACAAGGCCAGATGGGAGCTGTTAGAGTTATGGCAAAAGATCTTGTTAGAACAAGGCATCAGATTGAAAAGTTTTATAAACTAAAATCACAGCTCCAAGGTGTATCACTCAGAATTCAGACTTTGAAATCGACACAAGCAATGGGTGAGGCTATGAAAGGTGTGACAAAAGCCATGGGGCAAATGAATAGGCAGATGAATTTGCCATCGTTGCAGAAAATCATGCAAGAATTTGAGAGACAAAATGAGAAGATGGAATTGACATCTGAGGTCATGGCAGATGCAATAGATGATGCTTTGGAAGGGGACGAAGAAGAAGAGGAAACAGACGAACTAGTGAACCAGGTTCTTGATGAGATTGGAGTTGACATAAACCAAGAGCTTGTAAATGCACCATCATCAGCTGTTGCTGCCCCAGCTGCAAAGTCGAAGGTACCTCAAGTTGAAACTACAGAGAATGATGATGGCGGGATCGATAGCGATTTACAGGCACGGTTAGACAATTTAAGAAAAATGTAA 672 0.4092 MSFIFGKRKTPAELLRENKRMLDKSIREIERERQGLQTQEKKLILEIKKSAKQGQMGAVRVMAKDLVRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMELTSEVMADAIDDALEGDEEEEETDELVNQVLDEIGVDINQELVNAPSSAVAAPAAKSKVPQVETTENDDGGIDSDLQARLDNLRKM* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0166 223 Gene3D - 6 181 - -
Lan15g0166 223 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 1-LIKE 1 223 - -
Lan15g0166 223 Pfam Snf7 17 186 IPR005024 GO:0007034
Lan15g0166 223 MobiDBLite consensus disorder prediction 183 223 - -
Lan15g0166 223 Coils Coil 12 46 - -
Lan15g0166 223 MobiDBLite consensus disorder prediction 209 223 - -
Lan15g0166 223 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 1 223 IPR005024 GO:0007034
Lan15g0166 223 Coils Coil 119 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0166 Lan-Chr15 1824063 1827156 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0166 K12191 - gmx:100526885 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0981 12 16577707 16580254 Lan15g0166 15 1824063 1827156 PCT
Lan15g0166 15 1824063 1827156 Lan12g0981 12 16577707 16580254 PCT