Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0148 ATGGTTGTAAGGCTTCGATTATCTCGATTTGGTTGTAAAAACAAACCATTTTATAGAGTCATGGCTGCTGATAGCAGATCCCCAAGAGATGGAAAACACCTTGAACTTCTTGGTTACTATAATCCCTTACCAGGTCAAGATGGTGAGAAAAGAATGGGTCTCAACTTTGATAGAATCAAATATTGGCTTTCTGTTGGAGCTCAACCTTCAGACCCTGTGGAGCGTCTTCTATTCCGAGCAGGGTTACTGCCCCCACCACCAATGGTAGCAATGGGACATAAAGGTGGACCACGTGATACGCGCCCTGTTGATGCGCTAACTGGACGCATCCTGAATCAAGAGAAGCCAGCTAGTACAAGCCAAAAGGAAGATGATGGTGAACATGACACTACTACAACCGGAAACCCCTAA 411 0.4526 MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLELLGYYNPLPGQDGEKRMGLNFDRIKYWLSVGAQPSDPVERLLFRAGLLPPPPMVAMGHKGGPRDTRPVDALTGRILNQEKPASTSQKEDDGEHDTTTTGNP* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0148 136 MobiDBLite consensus disorder prediction 88 136 - -
Lan15g0148 136 TIGRFAM S16: ribosomal protein bS16 3 82 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lan15g0148 136 Gene3D - 1 133 IPR023803 -
Lan15g0148 136 PANTHER 30S RIBOSOMAL PROTEIN S16-LIKE 1 114 - -
Lan15g0148 136 SUPERFAMILY Ribosomal protein S16 3 93 IPR023803 -
Lan15g0148 136 Hamap 30S ribosomal protein S16 [rpsP]. 2 80 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lan15g0148 136 Pfam Ribosomal protein S16 9 70 IPR000307 GO:0003735|GO:0005840|GO:0006412
Lan15g0148 136 PANTHER 30S RIBOSOMAL PROTEIN S16 1 114 IPR000307 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0148 Lan-Chr15 1678979 1680784 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0148 K02959 - gmx:100499851 234.572