Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0090 ATGATCAACTTCCAAACTCTTCCTTCTTTCGCCACTACTCCTTCACCTCTTCTTCCGCCGTCACATCACGCCGTTAACCACCACCAATTCCGCCGCAACCTATGCACCACAAAACGCCGCCGTTTTAATTTACCACCCACTCGCATAATAACGGTATGTTCCAATCACCCTCACCACACCGATGGCATAACCGTAAATTCCCAAGCTCCTCGAACCACCCGAAGAACCGTTTTGGTGGCACCGTTTCTCGCCGCCGGCGCGTCGTTTCTACTGTCAGCAAGAGCCGAAGAGAAAACTTCGCCGCCGTCGGCGGCGGCGGAGGAGTTGCCGGTTTCGATAAAAGAGGAGGTGATAACGTCGAGAATTTACGACGCGACGGTTATAGGAGAACCGTTGGCGATAGGGAAGGAGAGAGGAAAAGTGTGGGAGAAGTTGATAAATGCGAGAGTTGTGTATTTGGGTGAAGCAGAACAGGTTCCGGTTCGAGATGATAAGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAAGAGATGTTTGGAGAATGAGAAGAGTTTGTCTTTGGCTCTTGAAGCTTTTCCTTCTGATCTTCAAGAACAACTCAATCAATATTTGGATAACAAGATAGATGGAGAAACCTTGAAGTCATATACGTTGCATTGGCCACCTGAACGGTGGCAGGAGTATGAACCTATTCTTAGTTATTGTCGTGAAAATGGAATTCGTCTTGTGGCTCTTGGTACTCCACTAGCGATCTTAAGGACTGTCCAAGCAGAAGGTATTAGTGGGCTTTCAAAGGCTGAACGTAAAGCATATGCACCTCCAGCTGGTTCAGGCTTCGTATCAGGCTTTACTTCTATTTCACGTAGATCATCAGTTGATAGTACTCTAAATCCGTCTGTTCCTTTTGGTCCAAGGTCATATCTATCTGCACAGGCTAGGGTAGTTGAGGAGTATACTATGTCCCAGATCATCTTACAAAACGTGCTTGAAGGAGGAGCCACTGGTATGTTAATAGTTGTGACTGGTGCAAGTCATGTTACATATGGATCTAGAGGAACTGGTGTCCCAGCAAGAATTTCAAGAAAAATTCAAAAGAAAAACCAAGTAGTTATATTACTTGACCCTGAAAGGCAATTCATTCGTATAGAGGGAGAAGTTCCTCTTGCTGATTTTTTATGGTATTCTGCTGCTAGACCCTGTAGTAGAAATTGCTTTGACCGTGCTGAGATTGCTCGGGTTATGAATGCTGCTGGGCGGAGTAGAGATGCCCTTCCACAGGATCTTCAAAAGGGGATTGATCTTGGTTTAGTATCACCGGAGGTATTACAGAACTTCTTTGATCTAGAGAAGTATCCTCTGATTGCAGAACTCACTCACCGGTTTCAGGGTTTCAGGGAAAGATTGTTGGCAGATCCAAAATTCTTGAACAGATTAGCCATAGAAGAAGCTATATCAATAACAACTACACTATTAGCACAATATGAAAAGCGGAGAGAAAACTTTTTCCAAGAACTTGACTATGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCAACCTTGTCATTCCTTTCATATGCTGATGAGACGAATGCACCTTCTCTAATAGACTTTCTTGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGTAGGGACAAACTGGAATCTCAATCATAGAGTTGCATCAGTTGTATTTGGTGGTTTAAAACTAGCTGGTGTTGGGTTTATTTCAAGCATAGGAGCTGTTGCTTCATCAAATTCTCTTTATACAGTTCGTAAATTCTTTAATCCAGCTGTGATCACTAATCAACAAGTTCTAAGGTCACCAGTATTCAAAACAGCAATTGTTTACGCATTCTTTCTTGGAGTCTCTGCCAATCTACGGTATCAGATAATTGCCGGGTTAGTGGAGCAACGGATTTCAGATCAGTTTGCATCCCAAACATTTCTCGTAAATATGCTATCATTTGTAACAAGGACAATCAATTCCTATTGGGGAACCCAGCAATGGATTGACCTTGCCCGCTCTACTGGACTGCAAGTTAGAAAGATAGAGTCACCTACATCAGAAGAGTCTCCTGTTAATGGCGCAGTTGTATGCAACAAAACAGAAGAGCCCACCATTGATGACATAAAAAATGATTGA 2181 0.4324 MINFQTLPSFATTPSPLLPPSHHAVNHHQFRRNLCTTKRRRFNLPPTRIITVCSNHPHHTDGITVNSQAPRTTRRTVLVAPFLAAGASFLLSARAEEKTSPPSAAAEELPVSIKEEVITSRIYDATVIGEPLAIGKERGKVWEKLINARVVYLGEAEQVPVRDDKELELEIVKNLHKRCLENEKSLSLALEAFPSDLQEQLNQYLDNKIDGETLKSYTLHWPPERWQEYEPILSYCRENGIRLVALGTPLAILRTVQAEGISGLSKAERKAYAPPAGSGFVSGFTSISRRSSVDSTLNPSVPFGPRSYLSAQARVVEEYTMSQIILQNVLEGGATGMLIVVTGASHVTYGSRGTGVPARISRKIQKKNQVVILLDPERQFIRIEGEVPLADFLWYSAARPCSRNCFDRAEIARVMNAAGRSRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLIAELTHRFQGFRERLLADPKFLNRLAIEEAISITTTLLAQYEKRRENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYADETNAPSLIDFLGSIPDNAFQKNPVGTNWNLNHRVASVVFGGLKLAGVGFISSIGAVASSNSLYTVRKFFNPAVITNQQVLRSPVFKTAIVYAFFLGVSANLRYQIIAGLVEQRISDQFASQTFLVNMLSFVTRTINSYWGTQQWIDLARSTGLQVRKIESPTSEESPVNGAVVCNKTEEPTIDDIKND* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0090 726 CDD ChanN-like 149 373 IPR007314 -
Lan15g0090 726 PANTHER PROTEIN RETICULATA-RELATED 5, CHLOROPLASTIC 57 725 - -
Lan15g0090 726 Pfam Haem-binding uptake, Tiki superfamily, ChaN 141 360 IPR007314 -
Lan15g0090 726 Pfam Protein RETICULATA-related 467 647 IPR021825 -
Lan15g0090 726 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 57 725 - -
Lan15g0090 726 Gene3D - 136 399 - -
Lan15g0090 726 SUPERFAMILY EreA/ChaN-like 140 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0090 Lan-Chr15 622036 627376 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0090 - - mtr:MTR_3g071970 1088.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0090 15 622036 627376 Lan14g0168 14 2078301 2085100 LSH