Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0064 ATGGATTCATCTCATAATTTACCTTCCTTATGCTTTGAGCTTAGAATAATACAAGCCAAAAACATTGAGTGCATCAAATCTTCTGGAAACTCATTATTTGCAAGGTTTTATCTACCCACAGGAAACAACAACAAAATTCAACTCAACACCAAAAAGGTTTCCTCCAAATCTATGAATCCCTTTTGGAATGAGTCCTTTAATCTAGAATGTTCATGTCCTCAAGAATTCTTGGAGACCCTTGATCAGGAAAGCATGGTGTTGGAACTAAGGCAAAGAAAAAAGAAGATTTGGGGGTCAAATCTTATAGGAAAGGGTTTGATTCCATGGAAGAAAATTCTTGATTCATCAAATATGATGCTTAAAGAATGGGTGAAGATGGATTTGGTGAATGGAAGTGATGATATAATCAAGGCACCTGAAGTGCAAGTAGAGATAAAAATTAGGGTTAGTTCAATGGAGAATGAAGGGAATAACCAAACTAAGTGGGACAAGTGTGGGTGCAAAAATAGCCATGATCTTCATCCTTGGTTAAGTGCTGAAGATTATGATATTTTTACACTTGGGTCAGCTTTGGAAGCATTTTGA 585 0.3624 MDSSHNLPSLCFELRIIQAKNIECIKSSGNSLFARFYLPTGNNNKIQLNTKKVSSKSMNPFWNESFNLECSCPQEFLETLDQESMVLELRQRKKKIWGSNLIGKGLIPWKKILDSSNMMLKEWVKMDLVNGSDDIIKAPEVQVEIKIRVSSMENEGNNQTKWDKCGCKNSHDLHPWLSAEDYDIFTLGSALEAF* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0064 194 SMART C2_3c 11 121 IPR000008 -
Lan15g0064 194 ProSiteProfiles C2 domain profile. 1 124 IPR000008 -
Lan15g0064 194 PANTHER OSJNBA0006M15.15 PROTEIN 1 194 - -
Lan15g0064 194 CDD C2 12 125 - -
Lan15g0064 194 Pfam C2 domain 12 117 IPR000008 -
Lan15g0064 194 Gene3D C2 domain 1 160 IPR035892 -
Lan15g0064 194 PANTHER OSJNBA0006M15.15 PROTEIN 1 194 - -
Lan15g0064 194 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 133 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0064 Lan-Chr15 400438 401225 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0064 - - gmx:100807677 249.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0064 15 400438 401225 Lan3g1018 3 22402820 22403490 LSH