Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0058 ATGACATCTTCAGTGTTTGAGGATGTACCTGAAGAGGGAAAACACGAGCCGTCTGATTTGATCACCGAAAGCATGAATCTGACGGCTACAAACCTTTCACTTCCGAATGATACTTTTCTCAGAGCTGCAATTTCACTCAAGGACCAGGTGGTGGAAATGACTTGGAATCGAAGAGAAGTGATTGATCCAACGGTGTATAGTGGTCTTCTCGGAACAGCTTTCACTTGTTTGAGATCATACCAAGTTACTTCTAACAACAAAGACTTGCTACTATGTGCCCAGATTGTTCACACGTGCTCCAATCTTGCACGTGCCTCCCTAAGGCATGTGACATTTTTGTGTGGTAGAGGAGGAGTATATGCACTTGGTGCTGTGGTTGCTAATTACATGGGCGACCGTATAAAGCGTGATATGTTTTTGGGTCAATTCATTGAGGTAGCAAAAGAGAGAGCACTACCAATAGGACCAGAGGAAGGTGGATTTGGAATGTCATATGATCTTCTATATGGTAGAGCAGGATTTCTATGGGGGGCATTGTACCTAAACAAGTACCTAGGAGAAGATACAATTCCGAACGAGATCTTAATGCCGATAATCGACGCTGTATTTGCTGGTGGTAGAGCTGGTGCATCTGATATTAAAGATTGTCCATTGATGTATAGATGGCATGGTACTAGGTACTTAGGTGCAGCAAATGGTCTTGCTGGTATTCTTCATGTGTTACTTCATTTTCCACTTTGTAGTGACTATGTTGAGGATGTTAAGGGCACTTTGAGATACCTTATGAGTAAGAGGTTCCCTCATAGTGGAAACTACCCTTCAAGTGAAGGGAATCCAAGGGATAAGTTGGTGCAATGGAGTCATGGTGCAACAGGAATGGCTATGACTTTGTCCAAAGCAGCAGAGGTATTTCCAAATGAGAGAGATATAAGAGAAGCAGCAATAGAAGCAGGGGAAGTAGTGTGGAAGAATGGATTGTTGAAGAAAGTAGGATTAGGTGATGGTGTATCTGGAAATGCTTATGCCTTTCTTTCCCTTTTCAAACTAACTAAAGAGAGTATATATGAAGATAGAGCAAAAGCATTCTCTTGTTTCTTGTATGATAATGCAACAATAACAACAAGTGTAGCTGAAGAGGGTTATGCACCATTTATGGATGGTGGTGGTGGTGGTGATGCATATTCTCTTTTCCAAGGTCATGCTGGAACTGCATGCCTCTGGTTTGATTTGCTTGCACCCCACAATTCTAGATTTCCAGGCTATGAATTATAG 1272 0.4206 MTSSVFEDVPEEGKHEPSDLITESMNLTATNLSLPNDTFLRAAISLKDQVVEMTWNRREVIDPTVYSGLLGTAFTCLRSYQVTSNNKDLLLCAQIVHTCSNLARASLRHVTFLCGRGGVYALGAVVANYMGDRIKRDMFLGQFIEVAKERALPIGPEEGGFGMSYDLLYGRAGFLWGALYLNKYLGEDTIPNEILMPIIDAVFAGGRAGASDIKDCPLMYRWHGTRYLGAANGLAGILHVLLHFPLCSDYVEDVKGTLRYLMSKRFPHSGNYPSSEGNPRDKLVQWSHGATGMAMTLSKAAEVFPNERDIREAAIEAGEVVWKNGLLKKVGLGDGVSGNAYAFLSLFKLTKESIYEDRAKAFSCFLYDNATITTSVAEEGYAPFMDGGGGGDAYSLFQGHAGTACLWFDLLAPHNSRFPGYEL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0058 423 SUPERFAMILY LanC-like 46 423 - -
Lan15g0058 423 CDD euk_LANCL 65 419 - -
Lan15g0058 423 Pfam Lanthionine synthetase C-like protein 61 423 IPR007822 -
Lan15g0058 423 PANTHER LANC-LIKE PROTEIN GCL1 17 423 - -
Lan15g0058 423 SMART LANC_like_2 59 423 IPR007822 -
Lan15g0058 423 Gene3D - 7 423 IPR012341 GO:0005975
Lan15g0058 423 PRINTS LanC-like protein superfamily signature 62 80 IPR007822 -
Lan15g0058 423 PRINTS LanC-like protein superfamily signature 165 180 IPR007822 -
Lan15g0058 423 PRINTS LanC-like protein superfamily signature 227 243 IPR007822 -
Lan15g0058 423 PRINTS LanC-like protein superfamily signature 283 303 IPR007822 -
Lan15g0058 423 PRINTS LanC-like protein superfamily signature 330 343 IPR007822 -
Lan15g0058 423 PRINTS LanC-like protein superfamily signature 393 410 IPR007822 -
Lan15g0058 423 PANTHER LANC-LIKE PROTEIN 17 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0058 Lan-Chr15 363591 366661 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0058 - - aprc:113849930 666.381