Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0049 ATGACGGCGGTGGAGACGGTGGTGAGACTCCGTGTGATATTCGACGATGATGGCATGTTGAGCAAATCAAAGAAGAAAGAAGGGTTGAAACGTTGTTGGGTTCTACTGAAACCCAAAGAACACACCACAATTTCTCATCTTTCATCATATCTTCGTTCTATTTTCAACCTTCATCGAACTTGTCCCAATGGCACAATCCTCTCTATGGATGGCTTTGTTTTACCACCTTTTGAGTCGACTTGTATTTTTAAGGATAAAGACATTGTGTGTGTGAAAAGAAAAGGAAGCATTTCAACTGATGATAAACTTGCAAAGTTGTCATCTGTAGTTGATGGTGAGCATATAGGGCTTCCTAAACTTCTTGCAATTGAGGGGTTTCAAGGGGAGGATGGACGATGTGAAACCGTGTTGCAGGAGGATGAGAGTGACCAACATGAAGAAGATGAAGTTAATGTGGAATCTAATGCAACCTCAAAGAAAATAAAAGCACCAAAGAAGCTCTATAGTCAAGAGGATGACAGTGAACAACTTGAACAAGATGACACGGTTTATGTGGAATCTAATGCAAAGTCAAAGAAAAGAAAAGCATCAAAGAAGCTCAAGAGCGAAGAGGATGACAATGGCCAACATGAAGAAGATGATACAGTTTATGTGGAATCTAATGCAAAGTCAAAAAAAAGAAAAGCATCAAAGAAATCCAAGAGCCCTAGTAAGAAGAAGATTAAGTTGTCTTCTGCTGAAAAGTTAGCAGTCATTCACGAGAAGGAGGAAAATGCAAGTTTTGGAGGCCAGATTCATCACCAAAGTGTTGTCAACAAGGACAATGACAACTCATCTAAATTATCTAGGGAGCCAAAGAAGTCTAGCAACCTTGATCGTAAACAGAGTAACAATTCCAGTGGGTCTAAGGGTGACAAAACAAGGTCCCTTCAGCCTCAAGATGACGATGGAACAGAAACTATAAAGATGCCTAGCAGAAGTGCTCGACGGAAGAAAGCTAAGAGAAAATGGTTGAGAGAACTAAAATTGCAGCAGGAGAATGGGAAGCTCCATCCGAGTCCAATAGTTGAAAAAGATGGCCAACAATCACCTATCAAAGATAATAATTCCATAGTTTCTGATGTACATCAACAACCCGATGAAGAAAGTGAAGCAGAGGATGACATTATACCTGTGGAAATTAGGCCAGGGCATATTCGCTTTGAACCCCTTAGAAAAGATCAGGATGTACCACAGAATCAGTTTCCAGTGGAAACATTTCAATGGAATGGAACTACCAGCAAGAAGAAGGGCCAGAAATGGGGTACAGAGAGGATATCCTCTCGTAAACAGGATGACTATGAACATTCCACTCAAGAGTCTCCTAATGTTCATCATGCTGAAATTCAACACAGACTTAATCCTGTAGATTTTGATAAGCTTACACCTTATACTAGCTCGCCTAAGGAAGGTGATGTAATTGCATATCGATTGATTGAACTATCAGAATCATGGACACCAGAGCTTTCTTCTTTCAGAATTGGGAGAACATTGCACTATGATGCCAAATCAAACATGATTCAGCTTGAAGCAGTTTCAGAATATCCATTTGATTTTAAGAAGAAAATAGACGGGGATGAATCTTCTGAACAGTTTGATCCATCCCCTTATGGGGAAGATGGTTCTTTAGAGATAGATTATTTATCGCTTGCTGATGTTCGAATGGTTAAGCATGGAAACCCTGATTCAGCAACTGCAATTGCTCCTAGTGATGCTTGGGTCAATCTAGTAAAATCAACTAATGGTAGCATCAATGAAAAACTTGTGGGTGATCAAACTACTGTTGGAAATTCGCAAGAAAGGGAATGTCATACCCCTGCTAAAGATAATGGGAAAGTAAACTTGTGGGATGAACTTAACGAGGCCCTAGCAGCAAAGAAGGCCAAGTTGTCGGAGGTTGATGATGGCTGGAGTCATGTGAGTTCAGACTCACGATCATGGTCCCATAGAGCCTTGAGATGCAGTGCGCTGGGTCCAACAATGGCACGTTTAAGGGCACAAAACGGACTTTAA 2052 0.4079 MTAVETVVRLRVIFDDDGMLSKSKKKEGLKRCWVLLKPKEHTTISHLSSYLRSIFNLHRTCPNGTILSMDGFVLPPFESTCIFKDKDIVCVKRKGSISTDDKLAKLSSVVDGEHIGLPKLLAIEGFQGEDGRCETVLQEDESDQHEEDEVNVESNATSKKIKAPKKLYSQEDDSEQLEQDDTVYVESNAKSKKRKASKKLKSEEDDNGQHEEDDTVYVESNAKSKKRKASKKSKSPSKKKIKLSSAEKLAVIHEKEENASFGGQIHHQSVVNKDNDNSSKLSREPKKSSNLDRKQSNNSSGSKGDKTRSLQPQDDDGTETIKMPSRSARRKKAKRKWLRELKLQQENGKLHPSPIVEKDGQQSPIKDNNSIVSDVHQQPDEESEAEDDIIPVEIRPGHIRFEPLRKDQDVPQNQFPVETFQWNGTTSKKKGQKWGTERISSRKQDDYEHSTQESPNVHHAEIQHRLNPVDFDKLTPYTSSPKEGDVIAYRLIELSESWTPELSSFRIGRTLHYDAKSNMIQLEAVSEYPFDFKKKIDGDESSEQFDPSPYGEDGSLEIDYLSLADVRMVKHGNPDSATAIAPSDAWVNLVKSTNGSINEKLVGDQTTVGNSQERECHTPAKDNGKVNLWDELNEALAAKKAKLSEVDDGWSHVSSDSRSWSHRALRCSALGPTMARLRAQNGL* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0049 683 MobiDBLite consensus disorder prediction 389 407 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 362 376 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 258 457 - -
Lan15g0049 683 Pfam Coilin N-terminus 8 226 IPR031722 -
Lan15g0049 683 PANTHER COILIN P80 6 683 IPR024822 -
Lan15g0049 683 MobiDBLite consensus disorder prediction 308 326 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 262 276 - -
Lan15g0049 683 Coils Coil 186 213 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 139 246 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 412 430 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 292 307 - -
Lan15g0049 683 PANTHER COILIN 6 683 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 277 291 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 431 457 - -
Lan15g0049 683 MobiDBLite consensus disorder prediction 225 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0049 Lan-Chr15 308613 315259 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0049 K13150 - gmx:100776892 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0049 15 308613 315259 Lan3g1463 3 26183987 26191146 LSH