Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0040 ATGGAAATGATGCCATATCAACTTTCAAGGTTACCTTATCAAGATACCCTCAAATTGCTTGAAGCTGATATACAACATGCCAATGCTTTGGCTGCTGCAATTCCAAGAGGCAAGGGTGGGACTCTTCTTCAAATGAAATTGGTTTACAATCAACTAGCACCTCTTTTTCTATTACTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTTATACACAGATATCTCAACCTCTTCCACATACTTATATATAAGGTACACAATGATGGTAGATCAATAATGAGTACTCATGGAAGGAAAGCTACTGTTGAGGACTTTTATGCCGTCATATTGCCATCCCTCGAACGACTTCATGGTAGCTTGGGGAAGTTGGAGATTTCCGAAGAAGAGCACTCTCGCATAGAAGAAGGTTCAAGTCGTTGCAAGAAAATGATTGAAGGAGATGGGAAACTAAACAATGTCGATTTTCAAAGAGACGATGAGTGTGGTATTTGCCTAGAGCCTTGCACCAAAATGGTTTTGCCGAATTGCTGCCATGATATGTGTATTAGATGCTACCGCAAATGGAACACTAGGTCACAGTCGTGTCCATTTTGTCGTGGTAGCTTGAGGAGAGTTAATTCAGAGGATCTGTGGGTACTAACATGTGATGAAGATATTGTTGATGCCGAAACAGTTTCTAAGGAGGACTTGTGGCGATTCTACCTCTATATCAGCAAGCTACCCAAAGATCACCCTGATGCGCGTTTTCTAACATATTATGAATACCTGATTTAA 777 0.4067 MEMMPYQLSRLPYQDTLKLLEADIQHANALAAAIPRGKGGTLLQMKLVYNQLAPLFLLLLQWMDCSCAGFLIHRYLNLFHILIYKVHNDGRSIMSTHGRKATVEDFYAVILPSLERLHGSLGKLEISEEEHSRIEEGSSRCKKMIEGDGKLNNVDFQRDDECGICLEPCTKMVLPNCCHDMCIRCYRKWNTRSQSCPFCRGSLRRVNSEDLWVLTCDEDIVDAETVSKEDLWRFYLYISKLPKDHPDARFLTYYEYLI* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0040 258 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 6 258 - -
Lan15g0040 258 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 211 IPR013083 -
Lan15g0040 258 SUPERFAMILY RING/U-box 153 204 - -
Lan15g0040 258 Pfam Ring finger domain 160 200 IPR001841 -
Lan15g0040 258 ProSitePatterns Zinc finger RING-type signature. 177 186 IPR017907 -
Lan15g0040 258 SMART ring_2 162 199 IPR001841 -
Lan15g0040 258 PANTHER RING FINGER PROTEIN 41, 151 6 258 - -
Lan15g0040 258 ProSiteProfiles Zinc finger RING-type profile. 162 200 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0040 Lan-Chr15 251805 254712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0040 - - gmx:100790422 429.098