Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0019 ATGTCCAAAATGGCTTCTACTTGCAATAGGTGTTATGTGCTTATGGTACTTGGTATAGTTGTTATTAGTTCCATGGTGGCTTCATGTGGTGCTAACTTGTTACAAGATTTTGATTTAACATGGGGTGATAACCGTGCTAAGATATTCAATAAGGGACAACTTTTATCACTTTCTCTTGATAAAGCTTCTGGCTCTGGCTTCCAATCCAAGAAAGAGTACCTCTTTGGCAGGATTGATATGCAACTCAAGCTTGTTTCTGGAAACTCTGCTGGCACTGTTACTGCTTACTATTTGTCATCACAAGGGCCAACACATGATGAGATTGATTTTGAGTTCTTGGGTAATGTAAGTGGTGACCCTTACATTCTTCACACAAACGTCTTTAGCCAAGGCAAAGGGAATAGAGAGCAACAATTCTACCTTTGGTTTGATCCCACAAGAAACTTCCACACTTACTCTATCATCTGGAAACCACAACACATTATATTTTTGGTTGATAACATCCCCATAAGGGTGTTCAAGAATGCAGAATCAGTTGGTGTTCCATTCCCAAAGAACCAACCAATGAGAATCTACTCTAGTTTGTGGAGTGCTGATGATTGGGCTACAAGAGGTGGTTTGGTGAAAACTGATTGGTCAAAGGCACCCTTTATAGCTTACTACAGAAATTTCAAAGCCACTGAGTTCTCTTCTATCTCTTCCAATTCCTTATCTGATGAAGCAGTGCAAAGCAATGAGATTGATGCTAATGGTAGAAGAAGACTAAGATGGGTTCAGAAGTATTTCATGATATATAACTACTGCAAAGATCTTAAGCGATTCCCACAAGGTCTTCCTGCTGAGTGCTGA 849 0.3981 MSKMASTCNRCYVLMVLGIVVISSMVASCGANLLQDFDLTWGDNRAKIFNKGQLLSLSLDKASGSGFQSKKEYLFGRIDMQLKLVSGNSAGTVTAYYLSSQGPTHDEIDFEFLGNVSGDPYILHTNVFSQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNIPIRVFKNAESVGVPFPKNQPMRIYSSLWSADDWATRGGLVKTDWSKAPFIAYYRNFKATEFSSISSNSLSDEAVQSNEIDANGRRRLRWVQKYFMIYNYCKDLKRFPQGLPAEC* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0019 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 13 282 IPR044791 GO:0004553
Lan15g0019 282 CDD GH16_XET 30 282 IPR016455 GO:0010411|GO:0016762|GO:0042546
Lan15g0019 282 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 282 IPR013320 -
Lan15g0019 282 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 15 13 282 - -
Lan15g0019 282 Gene3D - 19 282 - -
Lan15g0019 282 ProSitePatterns Glycosyl hydrolases family 16 active sites. 107 117 IPR008263 GO:0004553|GO:0005975
Lan15g0019 282 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 27 221 IPR000757 GO:0004553|GO:0005975
Lan15g0019 282 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lan15g0019 282 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 245 282 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
Lan15g0019 282 PIRSF EndGlu_transf 1 282 IPR016455 GO:0010411|GO:0016762|GO:0042546
Lan15g0019 282 Pfam Glycosyl hydrolases family 16 35 214 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0019 Lan-Chr15 127860 129392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0019 4 282 Glycoside Hydrolase AT3G23730 70.588 9.40e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0019 K08235 - gmx:100499905 514.227