Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0976 ATGGAGGTTCGCTTACGGTTTCTCACTTCACTCTCTCTGTTACAGATATGTCTCATTTTATCATTAACAAAAGCAGACACAAACCTTCTTATGGCATCCAAGGTTACAACATCGGGGGAAAGACATTCTGAGAATTATTGTGCAATGTATGACCTTTGTGGAGCGCGAAGTGATGGTAAAGTATTGAATTGTCCACATGGTTCCCCAGCTGTGAAGCCAGATGATTTGCTCTCGTCGAAGATCCAAAGTTTGTGTCCAACAATTACTGGGAATGTTTGTTGTACAGAAGCTCAGTTTGACACATTAAAGAAGCAAGTTCAACAGGCAATTCCTTTTCTTGTAGGTTGTCCTGCATGCTTAAGAAACTTTTTGAATCTGTTCTGTGAGCTTACATGTTCTCCAAATCAGAGTTTATTTATCAATGTGACTTCAGCTGACAAGGTTGGTAGTAATTTGACAGTGAGTGGGATTGATTTTTTTGTAGCTGATGCTTTTGGTGAAGGGTTATATGAGTCCTGCAAGGAAGTAAAGTTTGGCACCATGAATTCCCGAGCTCTACAATTTATTGGTGCTGGTGCTCAAAATTTTATGGAGTGGTTTGCTTTTATTGGTAGAAAATCGGCCCCTCATAGTCCCGGTTCACCATATGCAATTACATTCCATCCAAATGCAAGCAAATCATCTGGCATGAAACCTATGAATGTTTCAACTTATTCATGTGGTGATATTTCTCTTGGCTGCTCTTGTGGAGACTGTCCTTCATCCTCAGTGTGCTCTAGTTCACCTTCAACTACCACTCATAAGAGGGACTCCTGCTCCATTAAAGTTGGGTCTTTAACGGTGAAGTGTGTTGATTTGATTTTAACAGTCTTATACATCATACTGGTTTCTGTGTTCTTGGGTTGGGGATTGTATCATCGGATAAGGGAAAGAAAACCGGAATCCCGAACAGGATCGGTGTCTAATATCATTAGTGGTGGTGTGCAGCATTCTTTAGATAGGGAGAAGGATGATAACCTCCCAACACAGATGATGCAAGATGATGCACTAAACAGAAATGGGGTCCAGCTCTCAGCAGTGCAAGGATACATGTCCATATTTTACAGGAAATATGGATCATATGTAGCTAAGAATCCAATTACGGTATTGTCTTCATCTTTGGCCATATTTCTTCTACTCTGTCTAGGTCTAATCCGGTTCAAGGTTGAAACACGACCTGAGAAGCTCTGGGTAGCACCTGGGAGTAAAGCAGCACGAGAGAAACAGTTTTTTGATAGCCACCTTGCTCCATTTTACAGAATTGAACAGCTCATACTGGCAACAGTTCCAGATCATGTGAATAATACAGCACCAAGAATTGTGTCAAAAGACAACATTGAGTTTCTATTTGAAATACAAAAAAAAGTTGATGCAATCCGTGCTAATTATTCTGGCTCGATGATATCTCTCCAAGACATCTGTTTGAAGCCACTGGACAAAGATTGTGCCACTCAAAGTGTTCTGCAGTACTTCAAAATGGACCCGAATAATTTCAATGATTATGGGGGAGCTGATCATCTTAATTACTGTTTCGAGCATTATACCTCAGCAGACCAATGTCTGAGCAGCTTTAAAGCTCCTCTTGATCCAAGCACTGTGTTAGGAGGTTTCTCTGGGAATAATTATTCTGCGGCATCTGCATTTATTGTAACTTATCCAGTAAATAATGCCATTGATGAAGAAGGAAATCAAACTGCCAAGGCAGTTGCTTGGGAGAAGGCCTTTATTCAGTTGGTGAAGGGTGAGCTTTTATCAATGGTGAAATCAAGAAATTTGACGCTTGCTTTTTCCTCTGAAAGCTCGATTGAGGAAGAGTTAAAAAGAGAAAGTACCGCAGATGCTATTACTATATTGATTAGCTATATTGTGATGTTCGCGTATATATCTCTTACTTTGGGGGATACATCACATCTTTCTTCTTTCTATATTTCATCTAAGGTATTGCTTGGTCTTGCAGGCGTAATGCTTGTAATGCTGTCTGTCATTGCATCAGTCGCATTTTTTAGTGCCCTTGGTGTAAAATCTACACTGATCATCATGGAAGTTATCCCATTTCTTGTTCTAGCTGTTGGCGTGGACAATATGTGTATACTTGTTCATGCCGTAAAAAGGCAACAAATGGATTTGCCTTTAGAAGGACGAATAAGCAATGCACTTGTGGAAGTTGGACCATCTATAACACTGGCTAGTCTATCAGAGGTTTTAGCATTTGCAGTTGGAAGCTTTATTTCAATGCCTGCATGCCGTGTGTTCTCCATGTTTGCTGCATTGGCCGTTTTTTTGGATTTTATCCTGCAAGTTACTGCTTTTGTTGCTCTGATAGTTCTCGACTCTTTGCGAGCAGAGGATAAGAGAGTTGATTGTTTTCCATGCATAAAAGTGCGTTCAATGCGTGTGGATTTTGATAAAGGTGTTGGACAAAGTAAACTTGGTTTCTTGGCTCGATTTATGAAGGAGGTTCTTGCACCCATTCTGAGTATTTGGGGAGTAAAAATAGTTGTCATTGCTATTTTTACAGCATTTACATTGGCTAGCATTGCATTAAGCACTAGAGTCGAGCCTGGTTTGGCACAGAACATTGTTCTTCCTCGAGACTCATATCTTCAGGGCTATTTCAATAATGTTTCAGAATATCTCAGGGTTGGACCACCTGTGTATTTTGTAGTGAAGAACTATAACTACAGCTCTGAATCACTGCATACAAATCAGCTTTGCTCCATTAGCCAATGCAATTCAGACTCTCTTTTAAATGAGATTGCCAGAGCAGCCCTAGTACCAGACACAAGTTATATAGCCAAGCCAGCTGCTTCGTGGCTTGATGATTTTCTTGTGTGGGTATCTCCAGAAGCATTTGGGTGCTGCAGGAAGTTCATGAACGGGAGTTATTGCCCCCCGGATGATCAGCCTCCTTGTTGCACTGCTGGTGAAGGTTCTTGTGTTTCAGATGGAGTATGTAAAGATTGCACAACGTGTTTCCGTCACACAGATCTCCACAATGGTCGTGCATCTACAACACAGTTTAGGGAGAAACTGCCATGGTTTCTTAGTGCTCTGCCGTCTGCTGATTGTGCAAAAGGTGGTCATGGAGCTTACACAGGCAGCGTTGAACTGAAAGGCTATGAAAGTGGCATTATACAAGCATCATCATTCCGCACATATCATACACCACTGAACAAGCAGAATGACTTTGTTAATTCAATGAGGGCTGCTCAAGAGTTTTGTTCGAGAGTATCTGAATCTTTAAAGATTGAGATCTTCCCATATTCAGTGTTTTATATGTTTTTCGAGCAATACCTAAATATATGGAAAACTGCATTGGTCAACCTTGCTATAGCCATTGGTGCAGTATTTATTGTGTGCTTGGTTATCACATGGAGTTTTTGGAGTTCAGCAATCATTTTGTTGGTGTTGGTGATGATTGTTGTTGATCTTATGGGTGTGATGGCCATTCTAAAAATCCAGTTGAATGCTATTTCGGTGGTCAACCTTGTTATGTCAGTGGGCATTGCTGTTGAGTTTTGTGTGCATATGACTCATTCTTTTACTGTAACAAGTGGAGACAAAGATCGGCGTGTGAAGGAGGCTCTGGGTACAATGGGAGCTTCAGTCTTCAGTGGTATCACATTAACAAAGCTGGTTGGAGTTATTGTTCTTTACTTCTCAAGGACAGAAGTTTTTGTGATTTATTACTTTCAAATGTACTTGTCACTAGTACTTCTCGGCTTCTTGCATGGGCTTGTTTTCTTGCCGGTGGTATTAAGCATCTTTGGTCCACCTTCAAGATATACAAACAATGAGGAAGGGGAAAATGCTTCACCAAATTCTTCATAG 3870 0.4072 MEVRLRFLTSLSLLQICLILSLTKADTNLLMASKVTTSGERHSENYCAMYDLCGARSDGKVLNCPHGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFDTLKKQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSADKVGSNLTVSGIDFFVADAFGEGLYESCKEVKFGTMNSRALQFIGAGAQNFMEWFAFIGRKSAPHSPGSPYAITFHPNASKSSGMKPMNVSTYSCGDISLGCSCGDCPSSSVCSSSPSTTTHKRDSCSIKVGSLTVKCVDLILTVLYIILVSVFLGWGLYHRIRERKPESRTGSVSNIISGGVQHSLDREKDDNLPTQMMQDDALNRNGVQLSAVQGYMSIFYRKYGSYVAKNPITVLSSSLAIFLLLCLGLIRFKVETRPEKLWVAPGSKAAREKQFFDSHLAPFYRIEQLILATVPDHVNNTAPRIVSKDNIEFLFEIQKKVDAIRANYSGSMISLQDICLKPLDKDCATQSVLQYFKMDPNNFNDYGGADHLNYCFEHYTSADQCLSSFKAPLDPSTVLGGFSGNNYSAASAFIVTYPVNNAIDEEGNQTAKAVAWEKAFIQLVKGELLSMVKSRNLTLAFSSESSIEEELKRESTADAITILISYIVMFAYISLTLGDTSHLSSFYISSKVLLGLAGVMLVMLSVIASVAFFSALGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQQMDLPLEGRISNALVEVGPSITLASLSEVLAFAVGSFISMPACRVFSMFAALAVFLDFILQVTAFVALIVLDSLRAEDKRVDCFPCIKVRSMRVDFDKGVGQSKLGFLARFMKEVLAPILSIWGVKIVVIAIFTAFTLASIALSTRVEPGLAQNIVLPRDSYLQGYFNNVSEYLRVGPPVYFVVKNYNYSSESLHTNQLCSISQCNSDSLLNEIARAALVPDTSYIAKPAASWLDDFLVWVSPEAFGCCRKFMNGSYCPPDDQPPCCTAGEGSCVSDGVCKDCTTCFRHTDLHNGRASTTQFREKLPWFLSALPSADCAKGGHGAYTGSVELKGYESGIIQASSFRTYHTPLNKQNDFVNSMRAAQEFCSRVSESLKIEIFPYSVFYMFFEQYLNIWKTALVNLAIAIGAVFIVCLVITWSFWSSAIILLVLVMIVVDLMGVMAILKIQLNAISVVNLVMSVGIAVEFCVHMTHSFTVTSGDKDRRVKEALGTMGASVFSGITLTKLVGVIVLYFSRTEVFVIYYFQMYLSLVLLGFLHGLVFLPVVLSIFGPPSRYTNNEEGENASPNSS* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0976 1289 Gene3D Multidrug efflux transporter AcrB transmembrane domain 1077 1275 - -
Lan14g0976 1289 PANTHER PATCHED FAMILY PROTEIN 4 1284 - -
Lan14g0976 1289 Gene3D Multidrug efflux transporter AcrB transmembrane domain 586 798 - -
Lan14g0976 1289 PANTHER NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1 4 1284 - -
Lan14g0976 1289 Pfam Niemann-Pick C1 N terminus 45 274 IPR032190 -
Lan14g0976 1289 SUPERFAMILY Multidrug efflux transporter AcrB transmembrane domain 604 789 - -
Lan14g0976 1289 Pfam Patched family 422 904 IPR003392 GO:0016021
Lan14g0976 1289 Pfam Patched family 1061 1269 IPR003392 GO:0016021
Lan14g0976 1289 ProSiteProfiles Sterol-sensing domain (SSD) profile. 626 789 IPR000731 -
Lan14g0976 1289 SUPERFAMILY Multidrug efflux transporter AcrB transmembrane domain 1078 1270 - -
Lan14g0976 1289 TIGRFAM 2A060601: Niemann-Pick C type protein family 47 1270 IPR004765 GO:0005319|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0976 Lan-Chr14 16053163 16068278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0976 41 1289 Miscellaneous Gene Families AT1G42470 72.458 0.0 1845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0976 K12385 - gmx:100784611 2109.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0976 14 16053163 16068278 Lan14g0976 14 16053163 16068278 ECH