Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0974 ATGAGCAGGAGCTTGGGAATACCGGTGAAGCTACTCCACGAGGCGTCAGGTCATGTGGTGAGTGTGGAGCTTAAAAGTGGAGAGCTTTATAGAGGCAGCATGATTGAATGCGAGGACAACTGGAATTGTCAACTCGAGAGCATTACCTACACCGCCAAGGATGGAAAAACATCGCAACTTGAGCATGTATTTATTCGAGGGAGCAAAGTCAGGTTTATGGTCATCCCTGACATGCTGAAGAATGCTCCAATGTTTAAGCGTTTGGATGCAAGAGTCAAGGGCAAGGGTGCATCACTCGGTGTTGGTAGGGGCAGAGCAGTTGCCATGCGAGCAAAGGCTCAAGCTGCTGGCCGTGGAGCTGCACCTGGAAGGGGTGTACCACCAGTTCGGAGGTGA 396 0.5126 MSRSLGIPVKLLHEASGHVVSVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGSKVRFMVIPDMLKNAPMFKRLDARVKGKGASLGVGRGRAVAMRAKAQAAGRGAAPGRGVPPVRR* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0974 131 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM 1 128 IPR027141 GO:0006396
Lan14g0974 131 Gene3D - 3 86 - -
Lan14g0974 131 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D3 1 128 - -
Lan14g0974 131 SMART Sm3 10 75 IPR001163 -
Lan14g0974 131 CDD Sm_D3 8 77 IPR034099 GO:0000387|GO:0005681
Lan14g0974 131 Pfam LSM domain 11 74 IPR001163 -
Lan14g0974 131 SUPERFAMILY Sm-like ribonucleoproteins 8 125 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0974 Lan-Chr14 16043195 16046005 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0974 K11088 - gmx:100790315 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0974 14 16043195 16046005 Lan14g0974 14 16043195 16046005 ECH