Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0904 ATGGCTCATCACCACCACTCCCAACGGCACTACCAACCACAATCTCAGCCGTCTGATTCTTTCAGAAATATAAATTCAATTCATTTTGATGATCAGATGCCGCAGCCTCCATCCTATTCCTATCCCAATCCCACCGATTTCCCTCATCATCCTTTTCATGTTGTTGGGCTTGCTCCACCTGAAGGAAGCGATGGCGGCGCTGATTTGCAATGGAATTATGGTTTAGAGCCAGAGAGAAAAAGACTCAAGGAACATGATTTTATGGAGAGCAATTCTAAGATATCTTGTGTAGAGTTCATGAAACCTCGTTCAGTGTCCACTGGATTGGGTTTGTCACTTGAAAATAGCCGTATGTCTTCTGTTGGAAACTCTGCTTTGTTGTCGAATCTTGGCAACGATATCGATCGAGAGTTATTGCAGCAGGATGTGGAGATTGATAGATTTCTCAGAGCCGAGGGTAAACGATTGAGGGAAACAATTATAGAGAAGGTTCAGGCAACACAGCTTGAGAGCATTTCTATCATTGAAGACAGAGTCCTTCAGAAACTTCGTGAAAAAGAAGCTGAGATAGAAGGCATCAATATGAGGAACATTGAACTCGAGGAGCGACTGGAGCAGTTGGCTGTCGAAGCAGATGCATGGCAACAGCGAGCAAGTTACAGTGAGAATATGGTCGCTGCTCTGAAGTTTAACCTTGAGCAAGTTTACGCCCAAAGCAGAGACAGTAAAGAAGGATGTGGTGACAGTGAGGTTGACGATACAGCTTCATGCATCAAAGGCGGAACCATTGATTTTCATCTGCTCTCCAAAGGGAACAATAATATGAACGAGATGATGACATGTAAGGCGTGCAAAGTGAACAAAGTCAACATGCTTTTATTGCCGTGTAAGCATCTTTGCCTCTGTAAAGATTGTGAAAGTAAGCTTAGTTTTTGTCCTCAATGTCAATCCTCTAAATTTATTGGCATTGAGGTCTATATGTAA 984 0.4289 MAHHHHSQRHYQPQSQPSDSFRNINSIHFDDQMPQPPSYSYPNPTDFPHHPFHVVGLAPPEGSDGGADLQWNYGLEPERKRLKEHDFMESNSKISCVEFMKPRSVSTGLGLSLENSRMSSVGNSALLSNLGNDIDRELLQQDVEIDRFLRAEGKRLRETIIEKVQATQLESISIIEDRVLQKLREKEAEIEGINMRNIELEERLEQLAVEADAWQQRASYSENMVAALKFNLEQVYAQSRDSKEGCGDSEVDDTASCIKGGTIDFHLLSKGNNNMNEMMTCKACKVNKVNMLLLPCKHLCLCKDCESKLSFCPQCQSSKFIGIEVYM* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0904 327 PIRSF SBP1_RNase_bind 1 327 IPR017066 -
Lan14g0904 327 Pfam Zinc finger, C3HC4 type (RING finger) 279 317 - -
Lan14g0904 327 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 268 327 IPR013083 -
Lan14g0904 327 PANTHER F2G19.2 2 327 - -
Lan14g0904 327 MobiDBLite consensus disorder prediction 1 38 - -
Lan14g0904 327 Coils Coil 183 217 - -
Lan14g0904 327 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 2 327 IPR017066 -
Lan14g0904 327 MobiDBLite consensus disorder prediction 11 33 - -
Lan14g0904 327 ProSiteProfiles Zinc finger RING-type profile. 281 316 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0904 Lan-Chr14 15601427 15604007 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0904 269 317 Miscellaneous Gene Families AT4G39050 40.816 1.82e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0904 K19042 - gmx:100811918 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0904 14 15601427 15604007 Lan14g0904 14 15601427 15604007 ECH