Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0880 ATGTCGAATCGACATAGCCAGAGTAGGAATGAAGACAATAACAACAACAACAACAAGGGTTTCATCAAAACCCATCAAAAATTCATTCCCAAAAACCCTAATCCAAATCATGCTCAACCTGGATCATCGAACCAGAACCCAACCCTCTCAACCTCTCTCAGAGATAGACCACCATCCAAATCCAATGTTCCAATCGCTAGGGTTCAATTGGGTCATAGTGGAGAGTGGGTCCCAAACAGAGATTATGGTTCCAATGGCAATTTCGTAAAATACTTGCCTCAAGATGAGGCTGTTGCTGCTGGTCTTGGTGCTGAAGATGGTGCATTGGATCCTCTTGAATCTCAGAGAGTTGTTGATCTTTTGAATAGAGAGTTATCTCTGTTACTAAAACTCAAACCTAAAGAATTCTGGAAACAAGTGGCTACTGATACCTCCTTACATGAGTTTCTGGACAGCTTCCTACAATTTAGGAGCAGGTGGTATGACTTCCCTCATCGTGGGGTCAAAGGTATTGTCGCTGGTGTTATTGTTGGAGAGCTTGATTTAAGCCGACGTGTTTTCATGGTATTGTATCGCATTTCTTCTAATAAAGATCCCGGTGCTCGACCTGGTGATACCCTCAGTTTGAGAGACCATGAAGTTCTTTTGCAGGAGAAGAAGTTGCTTGAATTGCCAAAGTTGCTAGATATATGTGCTATATACAATCATGAAAATGAAGAACTCACAGGATTGTTGGTCAGAAATGCTTTGAATGCTCAGCCTTGGATCCATAATAATCTGACTACAGTGATATCCCATTTTCTAGGAATTGTCAGCACAATGCATGAGCGTTGCGTTTCTTCATTGGAGGTCTTATTTTCTTCTGGAAAACCTGATTACCAAAATGCTACTTTTCTACAAGATGATCTGCTGGAGGTGATGGACTTTATAAATGATGCAATTGTATCGGTGGATGCTTTTGTTAGTGCATACGAACCAGCAACTATATTCTTCTCCTCTCCAGTTGAAATGAGTTATGGGAATGAGGAACTGCTAAGTGTTCTTGCCAGACTGCATGATTCATTAATTCCATCATTGCAAAAGGGATTCCATATCTTATTTGGTGACAGACAAGATGTGGCAGTGTCTAATATCTTTGTAAGTTTGAAGATGTTAAGAATGAGATTGGTGAAGTTTGGTTGGCAATTATTCCAGTCGTGCTATCTAAGTGATGAAGTGTTCAGAGATGGCATCCCTTTACCATTTGCCATGACAATGTTTCCTGCCAATGTAGAGGACCCAATCATCCGAGCAGAGATTCTGGTTCAAACATTTAAAAAGATCAATTCAGTATCATTGAGTTTTCAGGAAATACATCAGAAGGGTACATTTCTTCAAGATATTGAAAGGACTTTCAATATATTAAGCAGGCTTGAGAGATTGAAGGATGATGGATGGATATTCATTGATGATGAACAGCTTCAATATATTTCTGGGATTTTGGGTTCTCAGAAAGAAATTTCTAAGGAGTCAATTTCTGCAATAGCCCCTGTGCCAAGCAAAGCATTGCAGATGGGTGAAGATGCCGTGATTATAGAATCAAAAATAAGTCAAATTAGGGATCTGTTTCCTGATTATGGTAAAGGGTTTTTAGCTGCATGTCTTGAAGTGTATGACCAGAATCCAGAGGAGGTTATTCAAAGAATTTTAGAGGGAACCCTTCATGAAGATCTGCAGCGCTTGGACACATCACTAGAAACAGTGCCACTACCCAAGTCCAGCACTTCGAGCAGGAATGATAAAGGAAAAGGCAAATTAGTTGATTCTACACCAATATCCTCAAATACAAAAGCTGTTGGTGGGAAGCAAATTACTGAGGGGCTATCCTCTGTTTCAGTAGGAAGATTTGTGAGGAAACCTATAGCTAACTCGCCAGATATGAATATTCTTGATAAAAGGGATGAGATAGATACATCAAAAACTGCTGCTATGGTTTCACAATATGAATATGATGATGAATATGATGACTCCTTCGATGATTTGGGTCTAAGCGTAGCAGACTCTGGAGTAGAGGAAAACGAACTACTAGGTGGCGGAATGAATGCAAAATTTGGAAAATCATGGGGAACAGAGACCGGAAACTCGGTCCAGAGTGCCCCTAATTCAAAATGGGGCTCTAAGAAAAAGCCACAGTACTATGTCAAGGATGGTAAGAATTACAGCTACAAGGTTGCAGGTGCAATAGCGGTGTCAAATTCTGATGAAGCCTCACTGGTTACTCAAGCTCAGGAAGAACTAATACACGGTCTTGGACGTGGTGGCAACCTTCCCCTTGGTGCAGTAAAGAAGCTGACAGATTCCTACAAGGAGGGTGGTAACCAATTCCATTCTTCTGAAACAGAAGGGAGAGGGACTATGGGCAATCCTGGAGGCAGGGGAAGGAAGGAAAGGGGACAACAAATCGAACCTCGTCAGCAGCCGGAGAATCAATCTGTTTCCGAGGTTGAAGGGAACGGGAATGTTTCAAATCCGAGGGGAAGAGGGAGAGGTAGAGGGAGGGGAGGAGGAAGAAACAATCATAACCAGAAGGATCGAGCCCTAAAGAAGCATTTCTCTGGAGTGGGTGGTTTTTAG 2613 0.4168 MSNRHSQSRNEDNNNNNNKGFIKTHQKFIPKNPNPNHAQPGSSNQNPTLSTSLRDRPPSKSNVPIARVQLGHSGEWVPNRDYGSNGNFVKYLPQDEAVAAGLGAEDGALDPLESQRVVDLLNRELSLLLKLKPKEFWKQVATDTSLHEFLDSFLQFRSRWYDFPHRGVKGIVAGVIVGELDLSRRVFMVLYRISSNKDPGARPGDTLSLRDHEVLLQEKKLLELPKLLDICAIYNHENEELTGLLVRNALNAQPWIHNNLTTVISHFLGIVSTMHERCVSSLEVLFSSGKPDYQNATFLQDDLLEVMDFINDAIVSVDAFVSAYEPATIFFSSPVEMSYGNEELLSVLARLHDSLIPSLQKGFHILFGDRQDVAVSNIFVSLKMLRMRLVKFGWQLFQSCYLSDEVFRDGIPLPFAMTMFPANVEDPIIRAEILVQTFKKINSVSLSFQEIHQKGTFLQDIERTFNILSRLERLKDDGWIFIDDEQLQYISGILGSQKEISKESISAIAPVPSKALQMGEDAVIIESKISQIRDLFPDYGKGFLAACLEVYDQNPEEVIQRILEGTLHEDLQRLDTSLETVPLPKSSTSSRNDKGKGKLVDSTPISSNTKAVGGKQITEGLSSVSVGRFVRKPIANSPDMNILDKRDEIDTSKTAAMVSQYEYDDEYDDSFDDLGLSVADSGVEENELLGGGMNAKFGKSWGTETGNSVQSAPNSKWGSKKKPQYYVKDGKNYSYKVAGAIAVSNSDEASLVTQAQEELIHGLGRGGNLPLGAVKKLTDSYKEGGNQFHSSETEGRGTMGNPGGRGRKERGQQIEPRQQPENQSVSEVEGNGNVSNPRGRGRGRGRGGGRNNHNQKDRALKKHFSGVGGF* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0880 870 SMART cue_7 524 566 IPR003892 GO:0043130
Lan14g0880 870 SUPERFAMILY UBA-like 523 581 IPR009060 GO:0005515
Lan14g0880 870 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 15 868 - -
Lan14g0880 870 MobiDBLite consensus disorder prediction 578 605 - -
Lan14g0880 870 Pfam CUE domain 526 566 IPR003892 GO:0043130
Lan14g0880 870 CDD CUE_ASCC2 526 565 IPR041800 -
Lan14g0880 870 ProSiteProfiles CUE domain profile. 524 567 IPR003892 GO:0043130
Lan14g0880 870 MobiDBLite consensus disorder prediction 1 63 - -
Lan14g0880 870 MobiDBLite consensus disorder prediction 816 833 - -
Lan14g0880 870 MobiDBLite consensus disorder prediction 1 58 - -
Lan14g0880 870 MobiDBLite consensus disorder prediction 783 797 - -
Lan14g0880 870 Gene3D - 522 567 - -
Lan14g0880 870 MobiDBLite consensus disorder prediction 782 870 - -
Lan14g0880 870 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 15 868 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0880 K18667 - gmx:100778129 1169.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0880 14 15432514 15440556 Lan14g0880 14 15432514 15440556 ECH