Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0873 ATGGCATGGTTAGCGCATTCTCTGGCAAATTCACTCCGATTAGATGAGGATGAAAACGACACCGTTTCAGACCCTCAAACTACGAACTATCACGATCTACTTTCATCAGAAGAATTTGAAGGGCATGGAGTCAAAGAGGATCTGAATGAAATCAAACAAACCCTAACCCGCCAATTGTGGGGAATGGCATCTTTCCTTGCTCCTCCTCCTCCTCCACCACCACCTCCAGGCCCAAGCCCAAGCCCAGGCCCAGGCCCATCCATTTCCAATTCCAATTCCATTCAACCAGAATCTGAAAATGAACAAGTTGTTGTTGATGCGGTTGTTTCAAATCAGATTCAAATTTCTTATAACGATGATCAGGACCAGGAACTGGAAATGGAGGAGTGGGCGATTCAACACGCTGTTGGAATTACGGATGAGGTGTTGACTTTTGCTATGAATATCTCTATGCATCCTGAAACGTGGTTGGATTTTCCTATTCAGGAAGAAGATGACACTCATGATTTTGATATGTCTGATGCCCAATGGGAGCATGCTATGGCCATTGAGAGACTTGCTCCTAGATTAGCTGCACTCAGAATTGAATTATGTCCTTGCCATATGAGTGAAAGTTACTTCTGGAAAGTGTATTTTGTGCTTTTACATTCAAGGCTTCATAAACAAGATGCAGAGATTTTGTCTACGCCTCAGGTCATGGCAGCCAGAGGAGCGTGGATGCAGGAATTGCACAAACAAACGAAACCTGAAGTTGAATATTTCAGAATAAGCAGTGCCTACTCAAGAGACATTGCTCAACATGATGATTTTGCTCTCAGCTTATCAGATCATGCCTATCCTGATGACATGCATCATCTGACATATGGATATGAAATAAGGACGGCAGATAACGAGACAGAGAAGCACACGGTTGAAAGTTCTGAAACACATTTCATTGACAAGTCTGTTATTGACGAAAGTCCAACTGGGAACAAGGATTTAAAATGTGGTCATTACTCTCAAACTATTATTCAAGACTATGATGATGATGATGATGATGAATGGCCAGACGAAGGTTCTGATTTAGGGGGGTATAGTGGAACGATTCTCCCCCTGGTGAATGAAGAAGACATATCTTTTAGTGATCTAGAGGATGATGATTATGCCATTAAACATGTTAGTTCCACCACAGGTTCAAAGTTGGTATGA 1188 0.4226 MAWLAHSLANSLRLDEDENDTVSDPQTTNYHDLLSSEEFEGHGVKEDLNEIKQTLTRQLWGMASFLAPPPPPPPPPGPSPSPGPGPSISNSNSIQPESENEQVVVDAVVSNQIQISYNDDQDQELEMEEWAIQHAVGITDEVLTFAMNISMHPETWLDFPIQEEDDTHDFDMSDAQWEHAMAIERLAPRLAALRIELCPCHMSESYFWKVYFVLLHSRLHKQDAEILSTPQVMAARGAWMQELHKQTKPEVEYFRISSAYSRDIAQHDDFALSLSDHAYPDDMHHLTYGYEIRTADNETEKHTVESSETHFIDKSVIDESPTGNKDLKCGHYSQTIIQDYDDDDDDEWPDEGSDLGGYSGTILPLVNEEDISFSDLEDDDYAIKHVSSTTGSKLV* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0873 395 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 391 - -
Lan14g0873 395 MobiDBLite consensus disorder prediction 340 360 - -
Lan14g0873 395 SUPERFAMILY BSD domain-like 137 223 IPR035925 -
Lan14g0873 395 MobiDBLite consensus disorder prediction 86 101 - -
Lan14g0873 395 MobiDBLite consensus disorder prediction 65 85 - -
Lan14g0873 395 PANTHER BSD DOMAIN-CONTAINING PROTEIN 1 391 - -
Lan14g0873 395 SMART wurzfinal6 167 219 IPR005607 -
Lan14g0873 395 ProSiteProfiles BSD domain profile. 164 219 IPR005607 -
Lan14g0873 395 Pfam BSD domain 167 223 IPR005607 -
Lan14g0873 395 Gene3D BSD domain 135 229 IPR035925 -
Lan14g0873 395 MobiDBLite consensus disorder prediction 63 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0873 Lan-Chr14 15374309 15378330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0873 135 217 EF-hand Containing Proteins AT1G69030 31.183 2.46e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0873 - - gmx:100794286 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0873 14 15374309 15378330 Lan14g0873 14 15374309 15378330 ECH
Lan15g1126 15 20050932 20054132 Lan14g0873 14 15374309 15378330 LSH