Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0865 ATGTATACACTAACATTTTATATTGTCATTAAATCATTAATCATTGATTTGTTAACCACAATTGACTCTCCAACAACTGACTTCGATTCCTTTGATTTGAAGCCTCAATTCTCAGCTCCTTCAGCTGCTGCTCCGGTATCTTATGGCCATCAAGGTTCGAGTATGAAGATTGATGTTCCGAATGGAAGGGTTGGTGTCATTATCGGTACCATCAAGTATCTTCAGTTGCAGACTGGTGCCAAAATCCAAGTTACTCGTGATACCGAGGCTGACCTTAATTCTTCAACTAGGATGGTTGAGATTACTGGTACTCCTGATGCGATTGCGGCCGCTGAGAGACTCATTAATGAGGTTCTTGCTGAGGCCGAGTCTGGGGGTTCTGGGATTGTTGGAAGGAGACTGTATGGACAAGCGGGATCCGATGAATTCTCGATGAAAATTCCAAATAATAAGGTTGGGCTTATAATTGGTAAAGGTGGAGAAACAATAAAGGGTATGCAAGCATCAACTGGAGCATGCATTCAGGTTTTCATTTTCAACTCATATTTTATGAATTCATTGTTCTTGTTACTAGTGATATTTCGTCATATCCTGGTTAATATTAACAAACATCTATTTTATTATACTGGTGGTTATTCTAGCAACTGGGACCAGTCCACTGCACCACCTGAACAGCAGTCTATTCAGGCTGGTGGTTATGATTACTATAGTCAGCAGCAAAATCCGGGGGTTCTGCACCCACACCTGATGGGTTCTACATACAATTACAGTCAACCACCTTCCTCTGGCTACAACCAACCGGGACAGGGTTATGCCCAGGACAGCTATGGTGCGTATAATGCACCTCCACAATCAGGGTATGGCCAACCACCAGAACATGATCAACAGCAAGGCTATAGCTCAGCCCCTAGCTATGGTAGTGGGAGTAATCAGGCACAAGATGGCCACACTTCCAACTGTAGCTCGCAGGGGGATTCAGCTCAAGCTGCACCTAGCCAACCAATAACAAGCCCAAACACTGCCAACTATCCACCTCAAGGAACTGCTCAGCCAGGTTATGGGGTACCCCCAACCTCCCAAGCAGCTTATGGCATCTCACCTCAATCTCGAAATTATGGTGATACTCCACTTCTTTATGGGGATACGCATCTGTTGTCCCACATTGTGCTCCCTGTTTATGGACTGACTAAGTCACCTAGCACAGCAGGATGCTATGGTCAGTCAGCATATACCCCTGCCCAGCCCCAACCATTTGGTTTTGGCGGTGCAGCACAACCAGGGTATGTGTATGGTGTTGTCGTGTCATTTATTTAG 1314 0.4521 MYTLTFYIVIKSLIIDLLTTIDSPTTDFDSFDLKPQFSAPSAAAPVSYGHQGSSMKIDVPNGRVGVIIGTIKYLQLQTGAKIQVTRDTEADLNSSTRMVEITGTPDAIAAAERLINEVLAEAESGGSGIVGRRLYGQAGSDEFSMKIPNNKVGLIIGKGGETIKGMQASTGACIQVFIFNSYFMNSLFLLLVIFRHILVNINKHLFYYTGGYSSNWDQSTAPPEQQSIQAGGYDYYSQQQNPGVLHPHLMGSTYNYSQPPSSGYNQPGQGYAQDSYGAYNAPPQSGYGQPPEHDQQQGYSSAPSYGSGSNQAQDGHTSNCSSQGDSAQAAPSQPITSPNTANYPPQGTAQPGYGVPPTSQAAYGISPQSRNYGDTPLLYGDTHLLSHIVLPVYGLTKSPSTAGCYGQSAYTPAQPQPFGFGGAAQPGYVYGVVVSFI* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0865 437 Gene3D K Homology domain, type 1 136 178 IPR036612 GO:0003723
Lan14g0865 437 Gene3D K Homology domain, type 1 47 135 IPR036612 GO:0003723
Lan14g0865 437 CDD KH-I 54 115 - -
Lan14g0865 437 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 14 177 - -
Lan14g0865 437 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 209 428 - -
Lan14g0865 437 Pfam KH domain 144 176 IPR004088 GO:0003723
Lan14g0865 437 Pfam KH domain 55 117 IPR004088 GO:0003723
Lan14g0865 437 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 136 176 IPR036612 GO:0003723
Lan14g0865 437 SMART kh_6 139 199 IPR004087 GO:0003676
Lan14g0865 437 SMART kh_6 51 120 IPR004087 GO:0003676
Lan14g0865 437 MobiDBLite consensus disorder prediction 289 368 - -
Lan14g0865 437 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 54 127 IPR036612 GO:0003723
Lan14g0865 437 ProSiteProfiles Type-1 KH domain profile. 52 115 - -
Lan14g0865 437 ProSiteProfiles Type-1 KH domain profile. 140 176 - -
Lan14g0865 437 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 209 428 - -
Lan14g0865 437 MobiDBLite consensus disorder prediction 247 368 - -
Lan14g0865 437 MobiDBLite consensus disorder prediction 247 282 - -
Lan14g0865 437 PANTHER K DOMAIN-CONTAINING PROTEIN-RELATED 14 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0865 Lan-Chr14 15310655 15314572 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0865 K13210 - gmx:100797476 321.627