Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0818 ATGTCTTCTTTTTCCACTCTGAGAAAATCCTTACTCTTATTCCACCGCTTCAATTCACAATCTTCTGTAACTTTTCCATCCATCACAAGTTCCGTTTTCAGATTTTCTCCGAAATGGGTTTCAGCAATTGTTGTGGGCTCCACTATTAGTCTTCTTTATTGGTTCTCTACTAAACCCAATTCTACTCATACACCCACTTTTTCAAATCCATTGTTCTTCTCCAAATTATCACTCCCTCAATCTTCTTACACGTCGCTTTTAAGCGATGGGTACAGGAGAAAGGTTTTTTTCAACTATGAGAAGCGCATACGGTTGCATAGTCCTCCTGAGAAGGTATTTGAATACTTTGCATCTTGTCGTAGTCCAGAAGGCGAACTACTGATGAGGCCCACGGACCTGATGCGAGCAATTGTTCCTGTTTTCCCTCCATCGGAATCCAACATTGTTAAAGATGGATACTTGCAAGGTGAAAGAAGTCCTGGCCACTTACATTGTCCCCCTTCCCAACTTTTCATGCTTTTTGATGTCAACACCGATGACCTTATATCTTTCAAGGAGGAGATAGATAAGGAAGAATTCAAGAAGGTGATGGCATTGATGCGATCTCATAACAGACAAGGCGTTCAGCACAGGAATGGACTACGAACTGGCCTGAAGGTCAATGGTTCTGTAGAAAATGGAGGGCTGGTGGAGTACTTTTTTGGTAAAGATGGAAAAGGATGCCTCAGCCATGATAAATTCATAAAATTTATGAGAGACTTGCATGATGAAGTTCTGAGGCTGGAGTTTGCTCATTATGACTACAAGTCTCGGAACACCATCTCGGCGAAGGACTTTGCATTTTCCATGGTTGCTTCTGCTGACATGAGTCACCTGGGCAGGTTGCTTGAGCGGGTTGAGGAATTGGACAATGATCCACGCTTTAGGGATGTACGCATCACATTCGAGGAGTTCAAAAAATTTGCAGAGCTGCGGAAGAATTTGTTACCATTTTCATTTGCCCTTTTCAGTTTTGCAAAAGTAAACAACACATTAACAAAAGATGATTTCCAGCGAGCTGCTTCACATGTTTGTGATTTATCTCTGTCTAACAATGTTGTTGAGATTGTTTTCCATTTGTTTGACACAAATGGGGATGGAAATCTAAGTTCAGATGAGTTTGTGAGAGTACTACACAAACGAGAGAAGGACATTGCCCAACCTGTGGGGTCAAGAATCCTTGGTTTATTGTCTTGCCGCTGGGAACTACACTGA 1254 0.4195 MSSFSTLRKSLLLFHRFNSQSSVTFPSITSSVFRFSPKWVSAIVVGSTISLLYWFSTKPNSTHTPTFSNPLFFSKLSLPQSSYTSLLSDGYRRKVFFNYEKRIRLHSPPEKVFEYFASCRSPEGELLMRPTDLMRAIVPVFPPSESNIVKDGYLQGERSPGHLHCPPSQLFMLFDVNTDDLISFKEEIDKEEFKKVMALMRSHNRQGVQHRNGLRTGLKVNGSVENGGLVEYFFGKDGKGCLSHDKFIKFMRDLHDEVLRLEFAHYDYKSRNTISAKDFAFSMVASADMSHLGRLLERVEELDNDPRFRDVRITFEEFKKFAELRKNLLPFSFALFSFAKVNNTLTKDDFQRAASHVCDLSLSNNVVEIVFHLFDTNGDGNLSSDEFVRVLHKREKDIAQPVGSRILGLLSCRWELH* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0818 417 SUPERFAMILY EF-hand 169 282 IPR011992 -
Lan14g0818 417 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Lan14g0818 417 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Lan14g0818 417 Gene3D - 167 283 - -
Lan14g0818 417 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 1 188 IPR039800 GO:0005509|GO:0006851
Lan14g0818 417 PANTHER EF HAND DOMAIN FAMILY A1,A2-RELATED 187 415 IPR039800 GO:0005509|GO:0006851
Lan14g0818 417 Pfam EF-hand domain pair 345 392 IPR002048 GO:0005509
Lan14g0818 417 CDD EFh_MICU 171 394 - -
Lan14g0818 417 SUPERFAMILY EF-hand 263 393 IPR011992 -
Lan14g0818 417 Gene3D - 286 402 - -
Lan14g0818 417 PANTHER CALCIUM-BINDING EF HAND PROTEIN 1 188 - -
Lan14g0818 417 PANTHER CALCIUM-BINDING EF HAND PROTEIN 187 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0818 Lan-Chr14 14987202 14991245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0818 38 356 EF-hand Containing Proteins AT4G32060 55.946 2.05e-138 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0818 K22827 - gmx:100786375 554.673