Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0815 ATGGGATTCATTAGCGGCATGATCATTGGTCTCATCATTGGCATTGGACTAATCATCGCTTTTGCTCGTTACGGAACCATCCGATCCAAGCGTCGCACCGATTTGGCAAAGACAATTGCAGCATTTGCAAGGATGACAGTGGAAGATTCTAGAAAACTTCTACCTCCTAAGTTCTATCCTTCATGGGTGGTTTTCACTCGTAGGCAGAAGTTAACTTGGTTTAATAGCCAACTTGAAAAGATTTGGCCATATGTTAATGAGGCAGCCTCAGATTTGATAAGAAGCAATGTGGAACCTATTCTTGAACAATACAAGCCTGTTATTTTGTCTTCTCTCACTTTCTCCAAATTGACCCTTGGCACTGTGGCTCCTCAATTTACAGGAATTTCAATTGTTGAAGAAGATAGTGGGTCTAATGGAGTGACGATGGAGCTTGAGATGCAATGGGACGGAAACCCGAATATCGTTCTTGACATTAAAACAAGAGTTGGTGTTGTACTTCCTGTGCAGGTAAAAAATATTGGATTCACTGGGGTTTTCAGGTTGATCTTAAAACCACTAGTAGATGAGTTCCCTGGTTTTGGAGCTGTTTGTTTTTCCTTGAGAGAAAAGAGAGATCTAGATTTTACTCTCAAGGTTATTGGTGGCGATCTATCTTCATTACCGGGAGTATCTGATGCTATAGAGGAAACAATTCGAGACGCCATTGAAGACTCAATAACTTGGCCAGTACGAAAAGTTATACCAATTTTACCAGGAGACTACAGTAACCTGGAATTGAAACCGGTTGGGACACTTGATGTAAAACTAGTGCAAGCAAAGGACTTAGCAAATAAAGATCTAATTGGGAAATCAGATCCTTTTGCTGTCTTATTTGTACGCCCACTTCGCGACAGAACAAAAACCAGTAAAACAATTAACAACCAGTTGAATCCAGTATGGAATGAGCATTTTGAGTTCACTATTGAAGATTCATCTACGCAACACTTAACCATAAGAATCTTCGACGACGAAGGCATTCAGGCTGCTCAGCTTATTGGATGTGCTCAAGTGCCTCTAAAGGACCTTGAACCTGGTAAAGTTAAGGTTGTATGGTTGAAACTGGTTAAGGATTTGGAAGTCCGTAGAGATAACAAATACAGGGGTGAGGTGCACTTGGAGCTCTTGTACTGTCCTATTGGAGATGACAGAAACAGCTTTAAGAACCCTTTTGACCCTGATTTCTCGTTAACCACATTCGAAAAGACCCTCAAGAGTGGGGCTGAGGAAGCACATGCAGAGAATCTTTCAAGATCATCATCATTAAGGAAGAGAAGCAACGTGATCGTGAGAGGGGTTCTATCTGTCACAGTGATTTCAGCTGAAGACTTGCCTGTAGTGGACTTAATGGGCAAGGCTGACCCATATGTAGTCCTTAATTTGAAAAAATCAGAGAAAAAACTCAAGACTAGGGTTGTAAATGAATCCCTAAACCCAGTTTGGAATCAAACATTTGACATTGTTGTGGAGGATGGCTTGCATGAAATGTTAATTCTTGAAGTGTGGGATCACGATACATTTGGCAAGGAAAAAATTGGAAGAGTGATATTGACACTGACTAAGGTGATATTGGAAGGAGAATATCAAGAAACTTTTCCATTAGAAGGAGCTAAATCAGGAAAAATTGATTTATATCTTAAGTGGACTCCTCAGCATAAGTATAGGGATCCTTAA 1713 0.4046 MGFISGMIIGLIIGIGLIIAFARYGTIRSKRRTDLAKTIAAFARMTVEDSRKLLPPKFYPSWVVFTRRQKLTWFNSQLEKIWPYVNEAASDLIRSNVEPILEQYKPVILSSLTFSKLTLGTVAPQFTGISIVEEDSGSNGVTMELEMQWDGNPNIVLDIKTRVGVVLPVQVKNIGFTGVFRLILKPLVDEFPGFGAVCFSLREKRDLDFTLKVIGGDLSSLPGVSDAIEETIRDAIEDSITWPVRKVIPILPGDYSNLELKPVGTLDVKLVQAKDLANKDLIGKSDPFAVLFVRPLRDRTKTSKTINNQLNPVWNEHFEFTIEDSSTQHLTIRIFDDEGIQAAQLIGCAQVPLKDLEPGKVKVVWLKLVKDLEVRRDNKYRGEVHLELLYCPIGDDRNSFKNPFDPDFSLTTFEKTLKSGAEEAHAENLSRSSSLRKRSNVIVRGVLSVTVISAEDLPVVDLMGKADPYVVLNLKKSEKKLKTRVVNESLNPVWNQTFDIVVEDGLHEMLILEVWDHDTFGKEKIGRVILTLTKVILEGEYQETFPLEGAKSGKIDLYLKWTPQHKYRDP* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0815 570 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 262 394 IPR035892 -
Lan14g0815 570 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 70 250 IPR039010 -
Lan14g0815 570 CDD C2 266 368 - -
Lan14g0815 570 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 441 564 IPR035892 -
Lan14g0815 570 Gene3D C2 domain 427 563 IPR035892 -
Lan14g0815 570 PANTHER SYNAPTOTAGMIN-4 1 569 - -
Lan14g0815 570 PRINTS C2 domain signature 462 474 IPR000008 -
Lan14g0815 570 PRINTS C2 domain signature 488 501 IPR000008 -
Lan14g0815 570 PRINTS C2 domain signature 510 518 IPR000008 -
Lan14g0815 570 SMART C2_3c 446 544 IPR000008 -
Lan14g0815 570 SMART C2_3c 265 365 IPR000008 -
Lan14g0815 570 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 67 251 IPR031468 GO:0008289
Lan14g0815 570 CDD C2 447 547 - -
Lan14g0815 570 Gene3D C2 domain 260 403 IPR035892 -
Lan14g0815 570 ProSiteProfiles C2 domain profile. 425 545 IPR000008 -
Lan14g0815 570 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 569 IPR045050 GO:0008289
Lan14g0815 570 Pfam C2 domain 445 547 IPR000008 -
Lan14g0815 570 Pfam C2 domain 264 368 IPR000008 -
Lan14g0815 570 ProSiteProfiles C2 domain profile. 245 366 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0815 Lan-Chr14 14971355 14976346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0815 260 511 Lipid Metabolism Gene Families AT3G61300 25.483 5.30e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0815 - - gmx:100787972 959.133