Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0757 ATGCTTCATTCACTGATGGGAATGGGAACTGGGCAATTTCTCGTTAGAGAACTTGAAAACCGTTTCGTTCCTAACTTGAGAAACTGCGTTAAAATTGTGGAATTGAAGAAGATTCATGCGCACATTGTGAAACTCTCACTGTCACAAAGCAACTTTTTGGTCACAAAAATGGTGGATTTATGCGATAACTTCGGCAACGTAGGTTACGCAACCTTGCTATTCGAACAACTCATTGAGCCAAACGTGTTCTCCTACAACGCAATCATCAGAACCTACACCCGTAATCACCAATATTCCTTAGCAATCACTCTGTTCAAACAAATGCTGAGAAATTCACGTGAACCAGGTCAAAATCCGATTTTCCCCGACCGATTCACGTACCCGTTTGTGATAAAATCGTGTTCAGGGCTTTTGTGGCATCATCTTGGTCTTCAAATCCACGCGCAAATTTGCAAATTAGGGTTCAAATCGCATTCTATAACAGAGAACGCACTGATTGATATGTACACAAAATGTGATGATTTGAGCAATGCACACAAAGTGTTTGAGGAAATGACTAATCGAGATACTATATCTTGGAATAGCCTAATACTTGGCCACACTAGATTGGGGCAGATGGACAGTGCAAGGGAATTGTTTGATGAAATGCCTTGTAGGACAATTGTGTCTTGGACAACAATGATAACAGGGTATTGTAGAATAGACTGTTACGCCGATGCATTGGACATATTTCGCGAGATGCAAATGGTAGGTATTGAACCTGATGAGATTAGTGTTACATCTGTTCTGCCAGCATGTGCACAGCTCGGAGCTCTTGAGGTTGGGAAATGGATTCACATGTACTCAGATAAAAAAGGGTTTTTGCAGAAGACTGGTATATGTAATGCACTGGTGGAAATGTATGCCAAGTGTGGTTGTATTGATGAAGCAATGCACTTGTTTGATCAGTTGGTTGAGAAGGATGTGATTTCTTGGAGTACCATGATTGGAGGACTCGCGAATCACGGAAGAGGTTATGAAGCAATTGAACTCTTTCAAGAACTGCAGAAAGCACAAGTGGTTCCGAATGGGATAACTTTTCTCGGCGTTTTGTCAGCATGCTCTCATGCAGGTTTATGGAATGAGGGATTGAAATATTTTGATGTTATGAGGGTGGATTATCATATAGTGCCAGAAATTGAGCACTATGGTTGCTTGGTTGATCTTCTGGGGCGCTCTGGATGCCTTGATCGAGCTCTTGACATGATACTGAAGATGCCTATGAAGCCAGATTCAAGGATATGGAACTCTTTGTTAAGCTTTTGTAGGATCCATCAGAATCTGGAGATTGCTGTTATTGCAATGGAAAAGCTTTTAGAGCTTGAGCCAGAGGAATCTGGGAACTATATTTTGCTTGCTAACATATATGCAGAACTTGGAAAGTGGGAAAGTGTATCAAATATTAGGAAACTCATAAGAAGCAAGAGGATAAAGAAAACCCCAGGATGTAGCTTGATTGAGGTTAACAATGTGGTTCAAGAATTTGTATCAGGTGACAAATCAAAGCCCTTTTCACAAGATGTCTTTTGGATCCTAGAAATGTTGGCTTTACACCAAGCTAGAATCAGTGACTTGATTGAACTTGCCTGA 1629 0.4088 MLHSLMGMGTGQFLVRELENRFVPNLRNCVKIVELKKIHAHIVKLSLSQSNFLVTKMVDLCDNFGNVGYATLLFEQLIEPNVFSYNAIIRTYTRNHQYSLAITLFKQMLRNSREPGQNPIFPDRFTYPFVIKSCSGLLWHHLGLQIHAQICKLGFKSHSITENALIDMYTKCDDLSNAHKVFEEMTNRDTISWNSLILGHTRLGQMDSARELFDEMPCRTIVSWTTMITGYCRIDCYADALDIFREMQMVGIEPDEISVTSVLPACAQLGALEVGKWIHMYSDKKGFLQKTGICNALVEMYAKCGCIDEAMHLFDQLVEKDVISWSTMIGGLANHGRGYEAIELFQELQKAQVVPNGITFLGVLSACSHAGLWNEGLKYFDVMRVDYHIVPEIEHYGCLVDLLGRSGCLDRALDMILKMPMKPDSRIWNSLLSFCRIHQNLEIAVIAMEKLLELEPEESGNYILLANIYAELGKWESVSNIRKLIRSKRIKKTPGCSLIEVNNVVQEFVSGDKSKPFSQDVFWILEMLALHQARISDLIELA* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0757 542 SUPERFAMILY TPR-like 82 477 IPR011990 GO:0005515
Lan14g0757 542 Pfam PPR repeat 191 218 IPR002885 -
Lan14g0757 542 Pfam PPR repeat 395 420 IPR002885 -
Lan14g0757 542 Pfam PPR repeat 163 188 IPR002885 -
Lan14g0757 542 Pfam PPR repeat family 220 267 IPR002885 -
Lan14g0757 542 Pfam PPR repeat family 80 134 IPR002885 -
Lan14g0757 542 Pfam PPR repeat family 320 368 IPR002885 -
Lan14g0757 542 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 189 219 IPR002885 -
Lan14g0757 542 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 321 355 IPR002885 -
Lan14g0757 542 Gene3D Tetratricopeptide repeat domain 14 187 IPR011990 GO:0005515
Lan14g0757 542 Gene3D Tetratricopeptide repeat domain 188 291 IPR011990 GO:0005515
Lan14g0757 542 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 220 254 IPR002885 -
Lan14g0757 542 PANTHER OS05G0439300 PROTEIN 15 539 - -
Lan14g0757 542 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 15 539 - -
Lan14g0757 542 Gene3D Tetratricopeptide repeat domain 294 515 IPR011990 GO:0005515
Lan14g0757 542 TIGRFAM PPR: pentatricopeptide repeat domain 323 356 IPR002885 -
Lan14g0757 542 TIGRFAM PPR: pentatricopeptide repeat domain 191 217 IPR002885 -
Lan14g0757 542 TIGRFAM PPR: pentatricopeptide repeat domain 83 115 IPR002885 -
Lan14g0757 542 TIGRFAM PPR: pentatricopeptide repeat domain 293 322 IPR002885 -
Lan14g0757 542 TIGRFAM PPR: pentatricopeptide repeat domain 222 256 IPR002885 -
Lan14g0757 542 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 81 115 IPR002885 -
Lan14g0757 542 Pfam E motif 438 500 IPR046848 -
Lan14g0757 542 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 290 320 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0757 Lan-Chr14 14511796 14514594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0757 36 528 Glycoside Hydrolase AT3G49170 31.791 1.70e-87 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0757 - - cam:101511241 841.262