Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0702 ATGCTTACTAATCAACACTTTCAAGGGGTTTCAAATTGCTATGTATTCAAGAGCCGGTTGCAGGAGTATGCTCAGAAGGTGGGACTTCCGACTCCGGTCTATGAAACTATGAAGGAGGGACCTTCCCATGAACCTTATTTCAGGTCGACAGTGATAGTGAATGATGTTCGCTATGATTCTTTGCCTGGGTTTTTCAACCGTAAAGCAGCAGAGCAGTCGGCTGCAGAAGTTGCTTTGGTGGAATTGGCCAAATCTAATGAAGTTAATCAATCCATCACTCAACCTGTTCATGAAACTGGATTGTGCAAGAATTTACTTCAAGAATATGCACAAAAGATGAATTACGCAATGCCTATGTATGTATGCAAAAAGGATGAAACACCAGGTCGAGCATCAAGGTTTACATGCACGGTTGACATAGGGGGGATCCTCTATATTGGAGGAGCAGCGAAGACAAAGAAAGAAGCAGAAATAAAAGCCGCCAGAACTGCTTTATTAGCTATCCAGACAAGTGCATCCCAACCTTCCCAAAACCAGTCTGTCCATTCACAGTTGACAGTCCTTCCAGGCAAAAAAAGGACAGGTGAATCTGCTGCCCTTGCTGGTGAGACTTCAAATACTCCAAAGCCGAAGAAATCACGATTTGTAAGGAAATCTTTGAAAAGGAAACATCGTAAAGATAAGAAGGGTCGTGGTTGTGTTGAAGGTGAGAGCGTTGGTGCGAATATCAATCATCAGGCAGAATCATTTGCAAGTGTTAAGGACGACTCTAGCATCCAGGAAATGAAATCTGGACTATTGACTTCAGAAGAAGTGAAGAATATTGGGAATGGAATTGCTGGTGAGAAAGAGACATTGACTGGGGAGGGTTCTTTTGCCCAGAATAGCCAAGGAAATCTTGAGAATGGGAAGTCAACAGAATTGCATTCCGAAGAGAACAATATTGTGACTGTTTCTTCAGAAGCTTCTTCTGTGCCTAAAGGAGACATACCAGAGATGAATAAAAAGCAATCTAATGGAGAAATGGTCTCTGATAAGTAA 1041 0.4227 MLTNQHFQGVSNCYVFKSRLQEYAQKVGLPTPVYETMKEGPSHEPYFRSTVIVNDVRYDSLPGFFNRKAAEQSAAEVALVELAKSNEVNQSITQPVHETGLCKNLLQEYAQKMNYAMPMYVCKKDETPGRASRFTCTVDIGGILYIGGAAKTKKEAEIKAARTALLAIQTSASQPSQNQSVHSQLTVLPGKKRTGESAALAGETSNTPKPKKSRFVRKSLKRKHRKDKKGRGCVEGESVGANINHQAESFASVKDDSSIQEMKSGLLTSEEVKNIGNGIAGEKETLTGEGSFAQNSQGNLENGKSTELHSEENNIVTVSSEASSVPKGDIPEMNKKQSNGEMVSDK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0702 346 Gene3D - 98 170 - -
Lan14g0702 346 SUPERFAMILY dsRNA-binding domain-like 16 85 - -
Lan14g0702 346 SUPERFAMILY dsRNA-binding domain-like 103 169 - -
Lan14g0702 346 MobiDBLite consensus disorder prediction 289 324 - -
Lan14g0702 346 CDD DSRM_AtDRB-like_rpt1 15 83 IPR044450 GO:0003725
Lan14g0702 346 MobiDBLite consensus disorder prediction 289 346 - -
Lan14g0702 346 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 15 84 IPR014720 -
Lan14g0702 346 Gene3D - 16 97 - -
Lan14g0702 346 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 101 170 IPR014720 -
Lan14g0702 346 SMART DRBM_3 102 169 IPR014720 -
Lan14g0702 346 SMART DRBM_3 16 83 IPR014720 -
Lan14g0702 346 MobiDBLite consensus disorder prediction 172 187 - -
Lan14g0702 346 MobiDBLite consensus disorder prediction 211 229 - -
Lan14g0702 346 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 1 1 312 IPR031147 GO:0003725
Lan14g0702 346 Pfam Double-stranded RNA binding motif 103 166 IPR014720 -
Lan14g0702 346 Pfam Double-stranded RNA binding motif 17 79 IPR014720 -
Lan14g0702 346 MobiDBLite consensus disorder prediction 172 239 - -
Lan14g0702 346 PANTHER RIBONUCLEASE III 1 312 IPR011907 GO:0003723|GO:0004525|GO:0006364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0702 Lan-Chr14 13977173 13980416 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0702 - - gmx:100782651 474.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0702 14 13977173 13980416 Lan14g0702 14 13977173 13980416 ECH