Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0697 ATGGATTCCATTTCTTCAACCACCGCCATTTTCGCGGCGCCTCCGTCACTCTCTTCATCCTTCTACTCTCTCTCCACAGCTCAACCTTCATTCACATTCCTCCGTAGGATGAACCCTAGAAGAATGGAGGCTCTTCGAGCATCCCAGGTTGACGCCGCCGCCGCTGCCGCCGACGCGAAGCCTAAGGAAGCTAAACTGTGGGGTGGAAGGTTCGAAGAAAGTGTGACCGATGCCGTTGAGAGATTCACTGAGTCGATCTCTTACGATAAGCAGCTCTATAAGCATGATATTATGGGAAGTAAAGCTCATGCTTCAATGCTCGCTCAACAGGGACTGATCACCTTAAATGATCGGGATTCTATTATTGAAGGTCTAAATGAGATTGAAAGACGCATTGAGAATGGCGAGTTCAATTGGAGGACTGACCGAGAGGATGTGCATATGAACATTGAAGCAGCACTTACCGATATGATTGGTGAGCCTGCCAAGAAGCTGCACACAGCTCGCAGCCGAAATGATCAAGTTTTGACTGATTTTCGCCTTTGGTGTCGTGATGCCATTGATAAGATCCTTAAAAGCATGAAGCACCTTCAGGTCTCATTAGTGACTTTGGCTTTGAAGAATGATGGTCTTATTGTTCCTGGTTATACTCATCTTCAGCGTGCACAGCCGGTTTTGTTGCAACACCTTCTGCTGGCTTATGTTGAGGAGATTGAGCGTGATGCTGGTCGTTTGGTAGATTGTAGAGCTAGGATGAATTTTTGCCCCTTAGGGGCTTGTGCTTTGGCCGGTACAGGGCTTCCCATTGATCGATTCATGACTTCGGATGCCTTGGGATTTACAGCTCCCTTGAGGAATAGTATAGATGCAGTTTCAGACCGAGATTTTGTTATGGAGTTTCTTTCTGCCAATGCCATCACAGCAGTGCATCTTTCTCGGCTTGGTGAAGAATGGGTATTGTGGGCTTCAGAGGAATTTGGATTTATCACACCAAGTGACTCTGTTTCAACTGGAAGTAGTATAATGCCTCAGAAAAAGAACCCAGATCCAATGGAACTTGTTCGTGGGAAGTCTGCCAGAGTCATAGGAGACCTGGTTACTCTTCTCACATTATGCAAAGGACTTCCTCATGCTTATAATCGTGATCTGCAGGAAGACAAAGAACCAGTGTTTGACAGTGTCAAAACGATTTTGGGGATGCTCGAGGTATCAGCAGAATTCGCACTTAACATTACTTACAATCGGGAAAGAATACAAAAGGCTTTACCTGCTGGTCATCTTGATGCAACAACACTTGCTGATTATCTTGTTAAGAAGGGAGTGCCATTTAGGACATCTCATGATATCGTTGGAAGAGCCGTTGCATTATGTACATCGAAGAACTGCCAACTGCTGGACTTGAGTCTTGACGAGCTGAGAAGTATAAATACAGTCTTTGACGAGGATGTGTATGAATTTCTTGGAGTAGAAAATTCGATCCAGAAGTTTAGCTCTTATGGATCCACCGGGTCAGCATGTGTTGCCAGCCAACTTGATTATTGGATAAAGAAGCTTGAAATCAATTGA 1566 0.4508 MDSISSTTAIFAAPPSLSSSFYSLSTAQPSFTFLRRMNPRRMEALRASQVDAAAAAADAKPKEAKLWGGRFEESVTDAVERFTESISYDKQLYKHDIMGSKAHASMLAQQGLITLNDRDSIIEGLNEIERRIENGEFNWRTDREDVHMNIEAALTDMIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDKILKSMKHLQVSLVTLALKNDGLIVPGYTHLQRAQPVLLQHLLLAYVEEIERDAGRLVDCRARMNFCPLGACALAGTGLPIDRFMTSDALGFTAPLRNSIDAVSDRDFVMEFLSANAITAVHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPHAYNRDLQEDKEPVFDSVKTILGMLEVSAEFALNITYNRERIQKALPAGHLDATTLADYLVKKGVPFRTSHDIVGRAVALCTSKNCQLLDLSLDELRSINTVFDEDVYEFLGVENSIQKFSSYGSTGSACVASQLDYWIKKLEIN* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0697 521 PRINTS Fumarate lyase superfamily signature 165 183 IPR000362 -
Lan14g0697 521 PRINTS Fumarate lyase superfamily signature 210 228 IPR000362 -
Lan14g0697 521 PRINTS Fumarate lyase superfamily signature 294 321 IPR000362 -
Lan14g0697 521 PRINTS Fumarate lyase superfamily signature 338 354 IPR000362 -
Lan14g0697 521 Gene3D Fumarase/aspartase (Central domain) 182 511 - -
Lan14g0697 521 TIGRFAM argH: argininosuccinate lyase 66 513 IPR009049 GO:0004056|GO:0042450
Lan14g0697 521 PANTHER ARGININOSUCCINATE LYASE 63 521 IPR009049 GO:0004056|GO:0042450
Lan14g0697 521 Pfam Argininosuccinate lyase C-terminal 428 493 IPR029419 -
Lan14g0697 521 Hamap Argininosuccinate lyase [argH]. 65 516 IPR009049 GO:0004056|GO:0042450
Lan14g0697 521 ProSitePatterns Fumarate lyases signature. 338 347 IPR020557 GO:0003824
Lan14g0697 521 Pfam Lyase 69 363 IPR022761 -
Lan14g0697 521 Gene3D - 85 292 IPR024083 -
Lan14g0697 521 CDD Argininosuccinate_lyase 85 518 IPR009049 GO:0004056|GO:0042450
Lan14g0697 521 SUPERFAMILY L-aspartase-like 66 518 IPR008948 GO:0003824
Lan14g0697 521 Gene3D - 423 495 - -
Lan14g0697 521 PRINTS Argininosuccinate lyase family signature 164 186 - -
Lan14g0697 521 PRINTS Argininosuccinate lyase family signature 205 225 - -
Lan14g0697 521 PRINTS Argininosuccinate lyase family signature 256 272 - -
Lan14g0697 521 PRINTS Argininosuccinate lyase family signature 294 318 - -
Lan14g0697 521 PRINTS Argininosuccinate lyase family signature 338 354 - -
Lan14g0697 521 PRINTS Argininosuccinate lyase family signature 373 392 - -
Lan14g0697 521 PANTHER ARGININOSUCCINATE LYASE 63 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0697 Lan-Chr14 13924466 13928889 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0697 K01755 - gmx:100796544 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0697 14 13924466 13928889 Lan14g0697 14 13924466 13928889 ECH