Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0679 ATGACGTGTGTATACCTTAATCATACCCATTCACTAACTCTAACCCATAAAAACACCTTACTTCTCCAACCCTCTCTTCCAAATAACCCTCTCTTTCTTCACCCATTATCCGTTATTCTCAAGCCTCAGTTTCGTGCATTATCTACCAAGTTCAGTGGGACCCAACAAGCCATGGCTAGCTTTGACTCTTTCTCTTACCTGACACAACGTGAAGCTGTTGAAGTTGATGAATCGCTCATGGGTCCTCTTGGTTTTAGCGTGGACCAGCTCATGGAATTGGCTGGTTTAAGTGTTGCTACTTCCATAGCTGAGGTTTACAAACCAAGTGACTATAGTCGTGTTCTTACAATTTGTGGTCCTGGTAACAACGGTGGTGATGGTCTGGTGGCTGCCCGTCACCTACATCATTTTGGTTATAAGCCCTTGGTCTGCTACCCAAAGCGTACACAGAAGCCTCTGTATGCTGGATTAGTTACTCAGCTCGAAGCACTGTCAATCCCATTCATGTCAGTGGAAGATCTACCGTCGGACTTGTCAGATGACTTTGACGTTGTTGTAGATGCGATGTTTGGATTCTCGTTTCATGGTTCTCCAAGGCCACCTTTTGATGATTTGGTTAATAGACTTGTTTCTTTACATAATCAAATTAGCCAAAAAAGATCGGTTATAATCTCTATAGATATTCCTTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGTACAGGCATTAAACCTGATATGTTGGTTTCTTTGACAGCCCCAAAATTATGTGCAAAGAAGTTTATTGGTCCTCACCACTTCCTAGGAGGTAGATTTGTCCCACCTGCTATTGCAGAAAAATATAAGCTTGTACTTCCACCATATCCTGGAACTTCCATGTGTGTACGAATCGGAAAGCCTCCTCAAGTTGATATTTCAGCTCTGAGAGAGAACTATATCTCTCCTGAGTTTCTTGAAGAGCAGGTCGAGGCAGACCCCATTAATCAGTTTCATAAATGGTTTGATGATGCGTTGGCTGCTGGGTTGAAGGAACCAAATGCTATGGCCTTGTCAACTGCAGGGAAGGATGGAAAACCCTCATCACGGATGGTATTGCTAAAAGGTGTGGATAAAGATGGATTTGTGTGGTATACAAATTATGAAAGTCAAAAGGCACGTGAATTGTCTGAAAATCCTCATGCATCACTTCTTTTTTACTGGGATGGTCTAAACCGGCAGGTACGGGTGGAGGGGTCTGTTCGGAAAGTATCTGATGAGGAATCGGAGCAGTATTTTCATAGCCGCCCTAGAGGAAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTTCTGTTGTGTCTGGAAGGCATGTTCTTCATCAGGAGTACAAAGAGCTTGAACAAAAATATGCTGATCAAAGTTTGATCCCTAAACCTAAGAACTGGGGAGGATACAGGCTAATACCGAATGCTTTTGAGTTTTGGCAAGGGCAGAAATCTCGCTTGCATGACAGGCTGCGATATTCTCCCCATGACGTCAATGATCAACGGCTATGGAAGGTTGAGCGGTTAGCCCCCTGA 1560 0.4385 MTCVYLNHTHSLTLTHKNTLLLQPSLPNNPLFLHPLSVILKPQFRALSTKFSGTQQAMASFDSFSYLTQREAVEVDESLMGPLGFSVDQLMELAGLSVATSIAEVYKPSDYSRVLTICGPGNNGGDGLVAARHLHHFGYKPLVCYPKRTQKPLYAGLVTQLEALSIPFMSVEDLPSDLSDDFDVVVDAMFGFSFHGSPRPPFDDLVNRLVSLHNQISQKRSVIISIDIPSGWHVEEGDVDGTGIKPDMLVSLTAPKLCAKKFIGPHHFLGGRFVPPAIAEKYKLVLPPYPGTSMCVRIGKPPQVDISALRENYISPEFLEEQVEADPINQFHKWFDDALAAGLKEPNAMALSTAGKDGKPSSRMVLLKGVDKDGFVWYTNYESQKARELSENPHASLLFYWDGLNRQVRVEGSVRKVSDEESEQYFHSRPRGSQIGAIVSKQSSVVSGRHVLHQEYKELEQKYADQSLIPKPKNWGGYRLIPNAFEFWQGQKSRLHDRLRYSPHDVNDQRLWKVERLAP* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0679 519 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 475 519 IPR019576 -
Lan14g0679 519 Pfam YjeF-related protein N-terminus 88 258 IPR004443 -
Lan14g0679 519 PANTHER NAD(P)H-HYDRATE EPIMERASE 58 504 - -
Lan14g0679 519 TIGRFAM yjeF_nterm: YjeF family N-terminal domain 70 261 IPR004443 -
Lan14g0679 519 Pfam Pyridoxamine 5'-phosphate oxidase 335 421 IPR011576 -
Lan14g0679 519 SUPERFAMILY FMN-binding split barrel 320 519 - -
Lan14g0679 519 SUPERFAMILY YjeF N-terminal domain-like 65 293 IPR036652 -
Lan14g0679 519 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 312 519 IPR000659 GO:0004733|GO:0008615|GO:0010181
Lan14g0679 519 ProSiteProfiles YjeF N-terminal domain profile. 72 286 IPR004443 -
Lan14g0679 519 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 485 498 IPR019740 GO:0016638
Lan14g0679 519 PANTHER NAD(P)H-HYDRATE EPIMERASE 58 504 IPR032976 -
Lan14g0679 519 Gene3D - 62 298 IPR036652 -
Lan14g0679 519 Gene3D - 313 511 IPR012349 -
Lan14g0679 519 TIGRFAM pdxH: pyridoxamine 5'-phosphate oxidase 302 519 IPR000659 GO:0004733|GO:0008615|GO:0010181
Lan14g0679 519 Hamap NAD(P)H-hydrate epimerase [nnrE]. 68 301 IPR004443 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0679 K23998 - gmx:100795497 865.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0679 14 13727553 13734145 Lan14g0679 14 13727553 13734145 ECH