Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0677 ATGGCTAACCGCGTTTTCTCCGCCGCAATCAAACGCATCACTTTCATTTTCGGCGCACGAAGCCATTGGAGCTCCGTCGCTTCTACATCGGATGAGTCATTCCTGCACAGATTGAAGAACCGAATCTTAGGACTCAAATCCCCTACAAGAAGTGCAATTCCCGCGCTTCAAAATTGGGTGGACCAAGGCAACAAACTTTCACACTTCGAACTTAGTCGCATTTCCAGGATACTCCTCAAATCGAAGCGCCATCACCACGCACTTGAGGTACTAAAATGGATGGAAAACCAGAAGAATTTTCATCTAGCCCCAGCTGATCATGCTATGAAATTGGAAATAATCATTAAAATGTATGGTCTATTGGAAGCTGAAGAGTACTTTATGAGTATACCTGATTCAGCTTCGAAGAAAGCTGCCTGTCTCGCCCTCCTGCGTGGTTATGTAAGAGATAGGGACACTAGTAAAGCTGAGACTTTCATGGTGAAGCTCTATGATCTGGGGCTAATGGTGAGCCCTCACCCTTATAATGAGATGATGAAACTGTATTTGGCCACATGTGAGTACAGTAAGGTACCCCTTGTTATTCAGCAAATGAAGCGAAATAGAGTACCATGCAATGTTTTGTCCTACAATCTTTGGATGAATGCTTGCAGCGAGGGAGGAGGGGACAGTGTTGCAGCTGTAGAGTCAATTTTTAGAGTAATACAAAATAATGAGAATATTGAAGTGGGATGGAGCAGTCTTGCTACTTTAGCCAATGTCTACATTAAAGCAGGACAATCTGACAAAGCCATTCAGGTTCTCAGATATGCAGAAAAGAAACTATCTACCTGTAACCGTCTTGGTTATTTCTTTCTCATAACACTATATGCCTCTTTGAAGGAAAAGGAGGGAGTATTGCGGCTATGGGAAGCTAGTAAGGCAGTTAGTGGAAGAATCAGTTGTGCTAACTACATTAGCATACTAACATGCATGGTGAAGCTTGGGGACATTGTACAAGCCAAGAGAATCTTCAGAGAATGGGAGTCTAATTGTCAGAAATACGATATCAGAGTCTCTAATGTTCTTTTGGGTGCATATGTGCGGAATGGATTAATAGAAGAAGCTGAAGCATTACATATCCATACATTGGAGAGGGGTGGTTGTCCAAACTATAAGACATGGGAGATTCTCATTGAAGGATTTGTTAAAAACCAAAAAATGGATGAGGCTATAATTGCCATGAAGAGAGCTTTGGCTTTGTTAAAGGATTGTGATTGGAGGCCACCACAAGGACTTGTATTAGCCATTGCAGAGTATTTGGAGAAACAGGGAAATTTTGATTATGCAAATGAGTATGTTACAGAAGTCCACAATATTGGTCTTGGGAATTTACTGTTGTATAAAATATTGCTTAGAATGCACATTTCTGCTAACAAACCACCTTTCCATATCCTTAAAATGATGGACAAAGATAAAGTTGAGATGGATAGTGAGACACTTTCCATTCTTAACGCCTTCACTGGGTAG 1509 0.4122 MANRVFSAAIKRITFIFGARSHWSSVASTSDESFLHRLKNRILGLKSPTRSAIPALQNWVDQGNKLSHFELSRISRILLKSKRHHHALEVLKWMENQKNFHLAPADHAMKLEIIIKMYGLLEAEEYFMSIPDSASKKAACLALLRGYVRDRDTSKAETFMVKLYDLGLMVSPHPYNEMMKLYLATCEYSKVPLVIQQMKRNRVPCNVLSYNLWMNACSEGGGDSVAAVESIFRVIQNNENIEVGWSSLATLANVYIKAGQSDKAIQVLRYAEKKLSTCNRLGYFFLITLYASLKEKEGVLRLWEASKAVSGRISCANYISILTCMVKLGDIVQAKRIFREWESNCQKYDIRVSNVLLGAYVRNGLIEEAEALHIHTLERGGCPNYKTWEILIEGFVKNQKMDEAIIAMKRALALLKDCDWRPPQGLVLAIAEYLEKQGNFDYANEYVTEVHNIGLGNLLLYKILLRMHISANKPPFHILKMMDKDKVEMDSETLSILNAFTG* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0677 502 Pfam PPR repeat 387 405 IPR002885 -
Lan14g0677 502 Pfam PPR repeat 354 374 IPR002885 -
Lan14g0677 502 Gene3D Tetratricopeptide repeat domain 71 250 IPR011990 GO:0005515
Lan14g0677 502 Gene3D Tetratricopeptide repeat domain 251 435 IPR011990 GO:0005515
Lan14g0677 502 SUPERFAMILY TPR-like 225 443 IPR011990 GO:0005515
Lan14g0677 502 Pfam Pentatricopeptide repeat domain 166 217 IPR002885 -
Lan14g0677 502 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 349 383 IPR002885 -
Lan14g0677 502 PANTHER OS12G0527900 PROTEIN 14 500 - -
Lan14g0677 502 PANTHER OS02G0796400 PROTEIN 14 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0677 Lan-Chr14 13716775 13721452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0677 45 422 EF-hand Containing Proteins AT1G02150 34.565 3.13e-82 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0677 - - gmx:100813805 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0677 14 13716775 13721452 Lan14g0677 14 13716775 13721452 ECH