Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0593 ATGTCACCTTCTCCTTCAGAAAACCGAAGCAGGTGGAGGAAGCGCAAGAGAGAATCGCAAATCGGCCGGCGGCAACAGAAGCACCACCACCACCACGAAGACAATGACGATGACGAAGAGGAGAATCGCAATGCCACCGCCGATGAGGACCATGATGACGACTCTGAGGACCAATTTCACCACCCTAACCCTCAATCCGCTACCAATCCCCAATCACACCATGAGATGGAGGTCCTCTCCGATCACGCCGTCCAGATTTCGCAATTCCCTGTCGTTGTCAAGCGCTCTGTCAACCGCCCTCACTCCTCCGTTGCCGCAATCATTGCTCTGGAGCGAGCTATCGAGTTCGGGGACAACAATCACCGTCAGCTCAGGAATGCTCCGGTGCTTGAGAATGTGTCCCATGGTCAGCTTCAGGCGCTGTCTACTGTTCCCGCTGATAGTGCCGCCTTGGATCAGGAGCGTGGTGGTGATGGCAGTAATTCGAGCTTTGTCATTACTACGCCAGCGATTTTGGAAGGCCGTGGCATTGTGAAACGCTTTGGGAATAGGGTGCTTGTAGTTCCCATGCATTCAGATTGGTTTTCACCAGTGTCAGTGCATCGACTAGAGAGACAAGCAGTGCCACATTTCTTTTCTGGAAAATCACCAGATCATACTCCAGAGAAGTACATGGAGTGTAGGAACTACATTGTTGCACTATACATGGAGGACCCAGAGAAAAGGATTACGGTCTCGGGTTGCCAGGGATTGTTAGTTGGGGTTGATAATGAAGATTTAACAAGAATTTGCAGGTTCCTTGATCATTGGGGAATTATCAATTACTGTTCTCGGGTGCCTTGTCATGAGACTTGGAATGATATGTCCTGCCTGATGGAGGACACAAATGGAGAGGTCCGTTTGCCATCAGATACTTTAAAATCCATTGATAGTTTGATCAAATTTGACAAGCCTAAGTGTAAGCTCAGAGCAGACGAAATTTATTCATCACTGACAACTCAGAATCCTGATGTCTCTGACCTCGATGACAAAATAAGAGAGCACCTATCTGAAAATCATTGCAATTATTGTTCTCGTCCTCTTCCTGTTGTATACTACCAGTCACAAAAAGAGGTTGATATTTTACTCTGCACTGATTGCTTTCATGATGGGAGATTTGTCATTGGTCATTCAAGTCTTGATTTTATAAGGGTGGATTCAACAAGGGATTATAGTGAGCTAGATGGGGATAGTTGGAGTGATCAAGAAACTTTGCTGCTGCTTGAAGCAGTGGAGATTTACAATGAGAATTGGAATGAAATTGCTGAGCATGTTGGTACCAAGTCAAAAGCACAATGCATTCTTCAATTTCTCCGTCTACCCATGGAAGATGGAAAATTGGAAAATATCAATGTTCCAAGCATGTCTTCATCTAATGTGACGAATAGAGATGATAGTGGAAGATTGCATCGTTGCTTAAATGGGGATTCCGAAGGACCTTTCCATCAAAGCAGCAACTCTGGCAGCAGGCTTCCCTTTGCAAATTCTGGAAATCCTGTTATGGCTCTGGTTGCGTTTTTAGCCTCTGCGGTTGGACCAAGAGTAGCTGCTTCTTGTGCGCATGCAGCATTAGGAGTATTGTCCGTGGATAATTCTGGGAGCACAACGCAGATGGAAGCACCGGTACATGGTAATAGGGCAAATTTGGAAAGCACACATAGTAAAGATGGTGGCCCTCGCGGAGAAATGGCAATTTTAACTGATCATAATGAGGATAAGTTTGGGACAATACCGCTTCCTTTGGAGAAAGTTAAAGAGGCAGCTAAAGCCGGCCTCTCTGCTGCAGCAACAAAAGCCAAATTGTTCGCTGATCATGAACAACGAGAAATTCAGAGGCTGTGTGCTAATATCGTTAATCATCAGTTGAAAAGATTGGAATTGAAGCTGAAGCAGTTTGCAGAAATTGAAACATTGTTGATGAAAGAATGTGAACAAGTCGAGAGGACGAGGCAGAGGTTTGCTGCGGAACGGTCCCATGTTATATCAGCACGTCGTGGAACTGGGGGAGCCACACCTCCGATGAATACATCAGGTGTTGGTCCTTCCATGGTTAACAGTAATGGCAACATCCGACAACAAATGATCTCTGCCTCTCCCTCACAACCGAGCATCTCAGGGTATGGCAACAACCAACAAGTTCATCCTCACATGTCCTTTGGTCCACGACCTTCAATGTTTGGGTTGGGGCAAAGGTTGCCCCTATCTATGATACAGCAATCACAATCAGCTTCTTCAAATGCACTGTTCAATGCCCCTAGTAATGTGCAGCCCACTTCAAATCATCCATTGTTGAGGCCTGTGTCAGGGACTAACTCTGGTTTAGGTTAA 2367 0.4597 MSPSPSENRSRWRKRKRESQIGRRQQKHHHHHEDNDDDEEENRNATADEDHDDDSEDQFHHPNPQSATNPQSHHEMEVLSDHAVQISQFPVVVKRSVNRPHSSVAAIIALERAIEFGDNNHRQLRNAPVLENVSHGQLQALSTVPADSAALDQERGGDGSNSSFVITTPAILEGRGIVKRFGNRVLVVPMHSDWFSPVSVHRLERQAVPHFFSGKSPDHTPEKYMECRNYIVALYMEDPEKRITVSGCQGLLVGVDNEDLTRICRFLDHWGIINYCSRVPCHETWNDMSCLMEDTNGEVRLPSDTLKSIDSLIKFDKPKCKLRADEIYSSLTTQNPDVSDLDDKIREHLSENHCNYCSRPLPVVYYQSQKEVDILLCTDCFHDGRFVIGHSSLDFIRVDSTRDYSELDGDSWSDQETLLLLEAVEIYNENWNEIAEHVGTKSKAQCILQFLRLPMEDGKLENINVPSMSSSNVTNRDDSGRLHRCLNGDSEGPFHQSSNSGSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALGVLSVDNSGSTTQMEAPVHGNRANLESTHSKDGGPRGEMAILTDHNEDKFGTIPLPLEKVKEAAKAGLSAAATKAKLFADHEQREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQVERTRQRFAAERSHVISARRGTGGATPPMNTSGVGPSMVNSNGNIRQQMISASPSQPSISGYGNNQQVHPHMSFGPRPSMFGLGQRLPLSMIQQSQSASSNALFNAPSNVQPTSNHPLLRPVSGTNSGLG* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0593 788 PANTHER SWI/SNF COMPLEX SUBUNIT SWI3C 66 787 - -
Lan14g0593 788 ProSiteProfiles Zinc finger ZZ-type profile. 349 403 IPR000433 GO:0008270
Lan14g0593 788 MobiDBLite consensus disorder prediction 1 75 - -
Lan14g0593 788 MobiDBLite consensus disorder prediction 462 503 - -
Lan14g0593 788 ProSiteProfiles Myb-like domain profile. 404 454 IPR001005 -
Lan14g0593 788 MobiDBLite consensus disorder prediction 545 561 - -
Lan14g0593 788 PANTHER SWI/SNF COMPLEX-RELATED 66 787 - -
Lan14g0593 788 Pfam SWIRM domain 189 275 IPR007526 GO:0005515
Lan14g0593 788 CDD SANT 411 453 IPR001005 -
Lan14g0593 788 SUPERFAMILY Homeodomain-like 409 462 IPR009057 -
Lan14g0593 788 ProSiteProfiles SWIRM domain profile. 186 284 IPR007526 GO:0005515
Lan14g0593 788 ProSiteProfiles SANT domain profile. 407 458 IPR017884 -
Lan14g0593 788 SMART sant 408 456 IPR001005 -
Lan14g0593 788 MobiDBLite consensus disorder prediction 39 53 - -
Lan14g0593 788 Pfam Myb-like DNA-binding domain 411 453 IPR001005 -
Lan14g0593 788 Gene3D - 408 458 - -
Lan14g0593 788 MobiDBLite consensus disorder prediction 750 788 - -
Lan14g0593 788 Gene3D - 192 278 IPR036388 -
Lan14g0593 788 SUPERFAMILY Homeodomain-like 185 277 IPR009057 -
Lan14g0593 788 MobiDBLite consensus disorder prediction 545 577 - -
Lan14g0593 788 Pfam SWIRM-associated region 1 603 678 IPR032451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0593 Lan-Chr14 12749063 12756215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0593 354 450 EF-hand Containing Proteins AT3G07740 33.962 2.34e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0593 K11649 - gmx:100780440 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0593 14 12749063 12756215 Lan14g0593 14 12749063 12756215 ECH
Lan15g0783 15 16957081 16963643 Lan14g0593 14 12749063 12756215 LSH