Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0564 ATGGTGCTCACATCGTGCGTTCGTGATTATGTTAACCGTATGTTGCAGGACATTTCCGGCATGAAAGTTCTCATCCTCGATTCTCAAACGGTTAGCATTGTGAGTGTTGTGTATTCACAGTCAGACCTTCTTCAGAAAGAAGTGTTTTTGGTAGAGTTGATAGATTCTATTTCCAAGTCAAAGGAACTGATGTCACATCTCAAAGCCGTGTACTTTCTTCGACCTACATCAGAGAACATCCAGCTATTGCGCCGCCAGCTGGCCAATCCTAGATTTGGAGAGTATCACCTATTTTTCTCCAACATATTGAAGGACACTCAGATTCATATACTTGCTGATTCAGATGAACAGGAAGCTGTCCAGCAAGTTCAGGAATTCTATGCAGACTTTGTTGCAATTGATCCTTATCACTTCACTTTGCATGTGCCTTCAAATTACATTTATATGCTCCCAGCGGTGGTAGATCCTTCAACAGTGCAGCGTTTCTGTGATCGGGTTGTTGATGGTCTTGCAGCTTTGTTTTTGGCATTTAAACGGAGACCAGTAATTAGATATCAAAGGACATCTGACATCGCAAAAAGGATAGCACAGGAAGCATCTAAACTGATGTACCAACAGGAAAGTGGTCTTTTTGACTTTAGGCGAACAGAAGTTGCTCCATTGTTGTTAGTGATTGACAGGAGGGATGATCCTGTAACACCATTGCTAAATCAATGGACCTATCAGGCTATGGTTCATGAATTGGTAGGAATTGAAGACAACAAAGTGGACTTGAAATCCATTGGTAAATTTCCAAAGGATCAGGAGGAGGTTGTGCTGTCATCGGACCAAGATTCCTTTTTCAAAACTAACATGTATGAGAATTTTGGAGATATAGGTATGAATATTAAACGGCTGGTTGATGAATTTCAGCAAGTGGCAAAGAGTAACCAGAACATTCAAACAGTAGAGGACATGGCCAAATTTGTTGACAATTACCCTGAGTACAGAAAAATGCATGGAAATGTGTCAAAACATGTGACTTTGGTAACAGAAATGAGCAAGATAGTTGAACAGCGAAAACTTATGATAGTTTCCGAAACAGAGCAAGAATTGGCTTGCAATGGAGGGCAAGGAGCTGCTTTTGAGGCACTGACAAATCTACTTAACAATGAAAGCATATTAGATGTGGACCGACTACGTTTGGTCATGCTATATGCTTTGCGATATGAGAAGGATAGCCCGGTTCAGTTAATGCAGCTTTTCAACAAACTGGCTTCCCGATCTGCCAAGTATAAACCTGGGCTTGTCCAGTTTCTTTTGAAGCAAGCAGGTGTTGACAAGAGAACTGGTGATCTTTTTGGAAATCGGGATCTCATGAATATTGCCCGTAACATGGCTCGTGGGTTGAAGGGTATTGAAAATGTTTACACCCAGCACCAGCCACTTCTGTTCCAAACCATGGAAAACATTGTCAAAGGGCGGTTGAGAGATGTCGACTACCCATTTGTTGGAAATCACTTTCAACAAGGAAGGCCACAGGAAGTGATCATATTCATTGTTGGTGGGACAACCTATGAGGAGTCACGATCAGTTGCTCTACAAAATACCAGCAATACCGGAGTTCGGTTTATACTTGGTGGCTCTTCTGTTCTTAATTCTAAAAGGTTTTTTACGGACTTGGAAGAAGCTCAAAGGGTAGCTCGTATTAGCACCTCTGTTGTTTAA 1707 0.4159 MVLTSCVRDYVNRMLQDISGMKVLILDSQTVSIVSVVYSQSDLLQKEVFLVELIDSISKSKELMSHLKAVYFLRPTSENIQLLRRQLANPRFGEYHLFFSNILKDTQIHILADSDEQEAVQQVQEFYADFVAIDPYHFTLHVPSNYIYMLPAVVDPSTVQRFCDRVVDGLAALFLAFKRRPVIRYQRTSDIAKRIAQEASKLMYQQESGLFDFRRTEVAPLLLVIDRRDDPVTPLLNQWTYQAMVHELVGIEDNKVDLKSIGKFPKDQEEVVLSSDQDSFFKTNMYENFGDIGMNIKRLVDEFQQVAKSNQNIQTVEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVEQRKLMIVSETEQELACNGGQGAAFEALTNLLNNESILDVDRLRLVMLYALRYEKDSPVQLMQLFNKLASRSAKYKPGLVQFLLKQAGVDKRTGDLFGNRDLMNIARNMARGLKGIENVYTQHQPLLFQTMENIVKGRLRDVDYPFVGNHFQQGRPQEVIIFIVGGTTYEESRSVALQNTSNTGVRFILGGSSVLNSKRFFTDLEEAQRVARISTSVV* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0564 568 Pfam Sec1 family 22 552 IPR001619 GO:0016192
Lan14g0564 568 PIRSF VPS45_Sec1 1 565 IPR001619 GO:0016192
Lan14g0564 568 SUPERFAMILY Sec1/munc18-like (SM) proteins 3 556 IPR036045 -
Lan14g0564 568 Gene3D - 2 128 IPR043154 -
Lan14g0564 568 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45 3 555 - -
Lan14g0564 568 Gene3D - 138 555 IPR027482 -
Lan14g0564 568 Gene3D - 353 474 - -
Lan14g0564 568 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 238 351 IPR043127 -
Lan14g0564 568 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 3 555 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0564 Lan-Chr14 11859045 11865070 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0564 K12479 - gmx:100782786 1040.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0564 14 11859045 11865070 Lan14g0564 14 11859045 11865070 ECH
Lan14g0564 14 11859045 11865070 Lan3g1626 3 28118564 28125779 LSH