Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0556 ATGCAGAAGAGTCACAAAGTTTCCACTATGTCTATTTCTTCACATCGAATCGCTACAATTCCTACACTCCTCATATCTATGTTCGCTACTTTCGCTTCTATTTACGTCGCTGGAAGGTTATGGCAGGACGCGCAGAACAGAGTTTATCTCATCAAACAACTCGATAGGATCACCGGTCAGGGACAATCTGCTATATCAGTTGATGATACATTGAAGATCATAGCCTGCAGGGAACAACATAAGAAGCTTGCTGCCCTTGAGATGGAGCTTGCTGCAGCTAGACAGGAGGGTTTTTCTTCAAACCGCTTGATAGAGAGTGAGACCAATGGGACTTACTCTAAGACAAGGCCCTTGGTAGTCATAGGTATACTCACAGGGTTTGGCGGGCGGAAGAATAGAGATGCAATTCGTAAGGCATGGATGGGAAGTGGTGCAGCTTTGCAAAAAATGGAGGATGGAAAGGGCATCATTGCACGATTTGTTATTGGCAGAAGTGCAAATCGCGGAGACAATTTGGATAAGGACATTGATCATGAGAATAGGCTGACTAATGACTTCCTCATTCTTGATGATCATGTGGAAACAGAGGAGGGGCTTTCAAAGAAGGCTAAATTGTTCTTTGCTCATGCTGCAGATAAATGGGATGCTGAATTCTATGCTAAAGTTAATGATGATGTTTATATAAATATTGATGCCTTAGGTGCTACACTTGCAACTCATTTGGACAAACCTCGTCTTTACATGGGATGCATGAAATCAGGCGAAGTTTTCTCTGAACCCAACCAAAAATGGTATGAACCAGAATGGTGGAAATTTGGTGACAAACAATCATATTTTCGTCATGCATCAGGAGAGATGTATGCAATTTCACGAGCTTTGGCTAAATTCATATCAATAAACAGATCTATGCTCCGTGCATATGCCCATGATGATGTCAGTGCTGGATCTTGGTTTATTGGGCTTGATGTAAAGCATGTTGATGACGCAAAGTTCTGTTGTTCGTCTTGGTCGACAGGAGCAATTTGTGCAGGTGTTTAG 1038 0.4239 MQKSHKVSTMSISSHRIATIPTLLISMFATFASIYVAGRLWQDAQNRVYLIKQLDRITGQGQSAISVDDTLKIIACREQHKKLAALEMELAAARQEGFSSNRLIESETNGTYSKTRPLVVIGILTGFGGRKNRDAIRKAWMGSGAALQKMEDGKGIIARFVIGRSANRGDNLDKDIDHENRLTNDFLILDDHVETEEGLSKKAKLFFAHAADKWDAEFYAKVNDDVYINIDALGATLATHLDKPRLYMGCMKSGEVFSEPNQKWYEPEWWKFGDKQSYFRHASGEMYAISRALAKFISINRSMLRAYAHDDVSAGSWFIGLDVKHVDDAKFCCSSWSTGAICAGV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0556 345 Coils Coil 76 96 - -
Lan14g0556 345 PANTHER HYDROXYPROLINE O-GALACTOSYLTRANSFERASE HPGT1 9 339 - -
Lan14g0556 345 Pfam Galactosyltransferase 132 327 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lan14g0556 345 Pfam Domain of unknown function (DUF4094) 22 95 IPR025298 -
Lan14g0556 345 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 9 339 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lan14g0556 345 Gene3D - 113 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0556 Lan-Chr14 11759727 11765498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0556 22 345 Glycosyltransferase AT5G53340 71.605 4.46e-180 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0556 K20854 - gmx:100807753 578.17