Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0515 ATGTCGGAGGGTTATTGGAGATACGGCGAACCACGGCATGCTCCGCCTTCCATCGCCGGAAAACGCTCCCGGAACGAATACGATGCCTCTGGCGTTCATGACTTGGCTAGTTACTATCCCCATGATGATGAGAGAGGAGGACTCCAATCAATTAGAGATACTGAATCCCTTGAAGCATCCTATGAGCGTTACCTCCATAGTGCGTCTACTAGAACCATTGGTGCGCGAATTCCCAGTCATTCTGTTGACGATTCACATGTCACAAGTATTGGTGGGGGAGTAGACCCAGGAAAAGACAAGATCCTGGGATTAGGTAGTGGAAGGCCTGACCATTCTCTTCCACCTGATGCTACCAATACACTGTTCGTGGAGGGTTTACCTCCTAACTGTACAAGACGGGAAGTAGCTCATATCTTCCGTCCTTTTGTTGGCTACAAAGAAGTCAGACTTGTTAGCAAGGGATCAAGACAGCCTGGGGGTGATCCACTGGTACTTTGTTTTGTCGATTTTGTGAGTCCAGCTCATGCAGCAACTGCCATGGATGCATTGCAGGGTTACAAATTTGACGAGCTTGACCGCAACTCGGTAAGTTTGAGGTTTCAATTTGCCCGCTATCCTGGTTCAAAGTCAGGTGTCGTGCATCGTGGCAAGCGTTGA 657 0.4901 MSEGYWRYGEPRHAPPSIAGKRSRNEYDASGVHDLASYYPHDDERGGLQSIRDTESLEASYERYLHSASTRTIGARIPSHSVDDSHVTSIGGGVDPGKDKILGLGSGRPDHSLPPDATNTLFVEGLPPNCTRREVAHIFRPFVGYKEVRLVSKGSRQPGGDPLVLCFVDFVSPAHAATAMDALQGYKFDELDRNSVSLRFQFARYPGSKSGVVHRGKR* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0515 218 MobiDBLite consensus disorder prediction 1 25 - -
Lan14g0515 218 SUPERFAMILY RNA-binding domain, RBD 94 189 IPR035979 GO:0003676
Lan14g0515 218 CDD RRM_RBPMS_like 119 199 - -
Lan14g0515 218 Gene3D - 115 210 IPR012677 -
Lan14g0515 218 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 119 205 IPR000504 GO:0003723
Lan14g0515 218 PANTHER PROTEIN MATERNALLY EXPRESSED GENE 5 16 218 - -
Lan14g0515 218 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 121 189 IPR000504 GO:0003723
Lan14g0515 218 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 16 218 - -
Lan14g0515 218 SMART rrm1_1 120 194 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0515 Lan-Chr14 10763476 10767832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0515 - - gmx:100800440 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0515 14 10763476 10767832 Lan14g0515 14 10763476 10767832 ECH