Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0479 ATGGCTGCTCGAACCCTATTCATCAAAAAAGCCCTACCTTTCTCCATCTTCCGCCACCGCACCGTGACGGCGGCGACAACAACTCACTCTCGTGGATTACAAACCGTCACACTACCCGATCTCGATTATGACTATGGCGCATTGGAACCTGCAATCAGTGGTGAAATCATGGAGCTACACCATCAGAAGCATCATCAGGCTTACGTCACCAATTACAATAAAGCTATTGAACAACTTGATAATGCACTTGTTAAGGGTGACGCCTCTACCGTTGTTAAGGTCCAGAGTGCCATTAAATTCAATGGAGGAGGTCATGTCAACCATTCTATTTTCTGGAAAAATCTGGCTCCTGTTCGTGAAGGAGGTGGTGAACTACCACATGATACCCTGGGATGGGCCATTGACACTCATTTTGGTTCCTTGGAAGCATTGATACAAAAGATGACTTCAGAAGGCTCAGCCCTTCAGGGGTCTGGATGGGTGTGGCTTGGTCTGGACAAAGAGTTCCAGAGGCTTGTAGTTGAAACCACTGAGAATCAGGACCCACTGGTTACTAAGGGTTCAAATTTGGTTCCATTGCTTGGTATAGATGTTTGGGAGCACGCATACTACTTGCAGTACAAGAATGTCAGACCTGACTATTTGAAGAACATATGGAAAGTTATTAACTGGAAATATGCGAGTGAATTGTATGAGGAAGAAAGCTCTTAG 711 0.4529 MAARTLFIKKALPFSIFRHRTVTAATTTHSRGLQTVTLPDLDYDYGALEPAISGEIMELHHQKHHQAYVTNYNKAIEQLDNALVKGDASTVVKVQSAIKFNGGGHVNHSIFWKNLAPVREGGGELPHDTLGWAIDTHFGSLEALIQKMTSEGSALQGSGWVWLGLDKEFQRLVVETTENQDPLVTKGSNLVPLLGIDVWEHAYYLQYKNVRPDYLKNIWKVINWKYASELYEEESS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0479 236 Pfam Iron/manganese superoxide dismutases, C-terminal domain 126 228 IPR019832 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 ProSitePatterns Manganese and iron superoxide dismutases signature. 197 204 IPR019833 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 PIRSF MnSOD_FeSOD 9 236 IPR001189 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 PRINTS Manganese superoxide dismutase signature 39 50 IPR001189 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 PRINTS Manganese superoxide dismutase signature 60 73 IPR001189 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 PRINTS Manganese superoxide dismutase signature 99 112 IPR001189 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 PRINTS Manganese superoxide dismutase signature 155 163 IPR001189 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 PRINTS Manganese superoxide dismutase signature 195 207 IPR001189 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 PANTHER SUPEROXIDE DISMUTASE 2 24 234 - -
Lan14g0479 236 Gene3D - 117 236 IPR036314 -
Lan14g0479 236 PANTHER SUPEROXIDE DISMUTASE 24 234 - -
Lan14g0479 236 Pfam Iron/manganese superoxide dismutases, alpha-hairpin domain 37 116 IPR019831 GO:0004784|GO:0006801|GO:0046872
Lan14g0479 236 Gene3D Fe,Mn superoxide dismutase (SOD) domain 53 116 IPR036324 -
Lan14g0479 236 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), C-terminal domain 120 233 IPR036314 -
Lan14g0479 236 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), N-terminal domain 33 117 IPR036324 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0479 Lan-Chr14 10306455 10309660 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0479 K04564 - gmx:100785490 384.8