Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0470 ATGGCTGAAGACAGCCCGTGCGGTGGTGGGTTTTCAGCTGGTCTGGCACTGATATTGGATGGCGAAGACAGTAACAAGAATTTTTCGAAAGCTAGACTTCTTTCTTCTTGTGATGATATGGGTCAACAATCTGTGGAGCGAACCCTTGAATATGTTTTCGGCCTCCCCAACAGATCGCTCAATCCATTGACTGGTCCAATCGACCGCAACTTAATCTGCACTGTCATAAGGAATGATTTCTCGAGATATAATGTGAAATTGAGTGATTCATTTATTGAAAGAGATGGAATTGGTGTTGGTAAAAATGGCCGTGGGTCTGATGTTGTAGGATTAGACGAATGCAGTATTTGTGGTGATATTAAAATCATCAAGTCACCATTTTTTATAGAGAGCTTGGCGATGTTCAGTAGTGCCAGGGCTAATGCTTGTGTTTGGCAAGGAAAATGGATGTATGAAGTTATGTTAGAAACATCTGGTATACAGCAGCTTGGTTGGGCCACTCTTTCTTGCCCTTTCACTGACCATAAAGGTGTTGGTGATGCTGATGATTCATACGCTTATGATGGGAGAAGAGTTAGCAAGTGGAACAAGGACGCAGAGACATATGGTCAGTCATGGGTTGCTGGAGATGTCATTGGATGTTGCATAGACCTAGATCGTGATGAAATACTATTTTACAGGAATGGGAATTCACTTGGGGTGGCATTTCGGGGAATTCAAAAAATGGGTCCTGGTTTTGGTTATTATCCTGCAATTTCTCTCTCCCAGGGAGAAAGATGTGATTTGAACTTTGGGGCCAGACCCTTTAAGTATCCCATTGAAGGCTACCTTCCTCTTCAGGCACCTCCCTCTAAAAGCTACTTCGTCACCCGGTTGCTGCAATGCTGGTCAAGGCTGTTGGACATGCATTCGGTGGGACGGGCCGAGCATTCTTTAGTTCAGAAATTGAGAAGAGTGAGGAGGTTTGATTCATTAGAAGAAATTTTCCATCCCGCATCCTATGCAATATGTGAGGAACTATTCTCTATTCTGGAAGCAGATATTGGGAACATAGAGTATATGGTTTGGGGTCCAATTTTATCTTTCATGTTTGAAGTTTTTGAATTGCATGCACCCCATGATTATTCAAGCTTGGATAAAGTGGTAGGAGCACTGCTACAATTTCAAGGATCACACATGCTATTAGAAAACATCATAAATGCTCTTTCCTGTGGTTGCAAAACAGCCTCATTAGTTCTATCTGAATGTCCTTACTCTGGATCATATTCTCATCTTTCGTTGGCATGTCATCTATTAAGACGAGAGGAACTTATGGTGCTTTGGTGGAAGGCACCGGATTTTGAATTCTTGTTTGAAGGTTTTCTGTCACAAAAGACTCCGAACAAGCAGGATCTTGACTCCATGGTACCAACTGTTTGGTGGCCTGGTTCATTTGAAGATGCGTCTTGTGAAGGTAACATGATATTGACAACCACGGCTTTGTCTGAATCAATCAGCAAGATTGAGGAGAAGCATAGGGCCCTTTGCCGCTTGGTGATACAATTTATACCACCGACAACACCTCCGCAGTTACCCGGAGCAGTGTTCCGAACATTTTTACAAAGCCTTCTGCTGAAGAACAGAGGAGCAGAACGAAATGTCCCACCTCCTGGAGTTTCTAGCAATTCGGTTCTTGTTTCAATTTATTCAGTTGTACTCCATTTTCTATCTGAAGGATTTGCCTCGGATGATATCTGTGGCTGGTTAAATAGCGGCAAAGCGGATGTTGGTTTCCTTCACAGAGGTGGCCAACAAGGTTTTCCAGTACAATTGTTTCTAAAAAATGACCCCCATAGAACTGATAATTCCAGGCTTGGAGGATCATATACCCATTTATTAAAGCTACACCCTGCAATTGATCATGAAATGCAAGTGGTTCTATGGGATGAAGGTTGCATGGATAGTGAAGAAACCAGAGTAACTCATTCTACCAGGCAGAAGCCATGCTGTTGTTCTACCTATGACTCTGATTTCACAAGAAACTTGAAGATTCCAGCTAAATTTATGGCCAAAGGTTCCAAGGGTCATTTTAGCTCTTTTCCAGAAAGACCTGCTCATGTTGCTTCCGAATGCAGTGATGAGAATTTGAATGATGAGATGACAGATAATAAACCTAGCTCCAGCGATCAGTCTGAACCTGAGTATGGTTACCGCCATATGCACCATATGAAATCTATACCAAAGGATACTAATATAATTACAGCTATGCTACAAGAAGAAGAACTACTCGATGCTTTGCTGTGGTTGTATCATGTTGGTCTTGCTCCGAATTTTAAGCAGGCATCATACTACATGACTCATCAGGCACAGTCAATATCCCTCTTGGAGGAAACTGATAAGCAAATAAGAGAAGGAGATTGCAGCGAGAAATTGAAGCATTTGAAAGAAACTCGTAGTGAACGTAGAGAAGAGGTTATCGATTGTGTCAGGCACTGTGCTTGGTATCGTATCTCTCTATTTTCTCGATGGAAGCAGAGAGGAATGTACGCAATGTGCATATGGGTTGTGCAGTTGTTGCTCGTTCTTAGCAATATGGATTCGGTGTTTGTCTTCATCCCTGAATATTACCTGGAAGCTCTGGTAGATTGCTTTCATGTGTTGCGGAAAAGTGATCCTCCATTTGTTTCATCCACAATTCTCATCAAGCGAGGACTTTCTTCATTTGTTACCTTTGTTGTTACCCATTTCAACGATCCAAGAATATCAAGAGCAGATCTTAGAGATCTTCTTCTTCAGTCTATATCTGTCCTGGTGCAATACAGGGAGTATTTGGAAGCTTTTGAGAGCAATGAGGCAGCTACCCAGAGGATGCCAAAAGCTTTACTATCAGCATTTGATAACAGATCTTGGATCACGGTAACAAACATATTCTTGCGATTGTGCAAGGGATCTGGTTTTAGTCTTTCAAAGAATGGAGAATCATCTTCGTCATCAGTTTTCCATTGGTTGCTTAAGGAAGCTTGCATAAATGATAAAGGGTTATTTTCATCTTTTCTAAACCGTCTATTCAATACACTTAGCTGGACCATGACTGAATTTTCAGTTTATGTTCGAGAAATGCAAGAAAAGTACCAGGTAATGGAGTTTCAGCAAAGGAAATGCTGTGTCATATTTGATCTTTCATGCAATCTTGCAAGGATTCTAGAGTTCTGCACTCATGAGATTCCCCAAGCATTCTTGTCTGGACACGACACAAACTTACGGAGGCTGACTGAGTTGATTGTATTTATATTAAATCACATTAGTTCTGCAGCCAGTGCTGAATTTATTGACTTGTCTCTTAGACGGCATAGCCAATCTTCAGAGAAAGTAAATCGAGGCATGATATTGGCACCTCTCACGGGGATCATCTTAAATTTATTGGATGCTACTCATCTGGAAGAATATCGAGAGAAGAATGATCTTTTGGATGTTTTTGTGAGCATGGACTGTCCAGATGCTGTCCATTATGGATTCCAGAATCTTCTGGATTATATCTGTGATGGATCTTTTCATGGGCAAGCTTTAGCAGCAAAATATGAGCAGCTAGAGAACTTTCACAGCCTCCTTACAATCCGTGCCACGATCCAACACAATAAAGTGGATGGTGCGGCAGATACCATTCCCGATGATAGCTTGTGCTGCATATGTTACACATGTGAAGCAGATGCCCAGATTGCACCTTGTTCACACAAGTCTTGTTATGGCTGTATAACCAGGCATCTTCTGAACTGCCAGAGATGTTTCTTTTGCAATGCAACAGTAACAGATGTTAGCAGAATTGTTGAGAAGACAGGCTAA 3819 0.4171 MAEDSPCGGGFSAGLALILDGEDSNKNFSKARLLSSCDDMGQQSVERTLEYVFGLPNRSLNPLTGPIDRNLICTVIRNDFSRYNVKLSDSFIERDGIGVGKNGRGSDVVGLDECSICGDIKIIKSPFFIESLAMFSSARANACVWQGKWMYEVMLETSGIQQLGWATLSCPFTDHKGVGDADDSYAYDGRRVSKWNKDAETYGQSWVAGDVIGCCIDLDRDEILFYRNGNSLGVAFRGIQKMGPGFGYYPAISLSQGERCDLNFGARPFKYPIEGYLPLQAPPSKSYFVTRLLQCWSRLLDMHSVGRAEHSLVQKLRRVRRFDSLEEIFHPASYAICEELFSILEADIGNIEYMVWGPILSFMFEVFELHAPHDYSSLDKVVGALLQFQGSHMLLENIINALSCGCKTASLVLSECPYSGSYSHLSLACHLLRREELMVLWWKAPDFEFLFEGFLSQKTPNKQDLDSMVPTVWWPGSFEDASCEGNMILTTTALSESISKIEEKHRALCRLVIQFIPPTTPPQLPGAVFRTFLQSLLLKNRGAERNVPPPGVSSNSVLVSIYSVVLHFLSEGFASDDICGWLNSGKADVGFLHRGGQQGFPVQLFLKNDPHRTDNSRLGGSYTHLLKLHPAIDHEMQVVLWDEGCMDSEETRVTHSTRQKPCCCSTYDSDFTRNLKIPAKFMAKGSKGHFSSFPERPAHVASECSDENLNDEMTDNKPSSSDQSEPEYGYRHMHHMKSIPKDTNIITAMLQEEELLDALLWLYHVGLAPNFKQASYYMTHQAQSISLLEETDKQIREGDCSEKLKHLKETRSERREEVIDCVRHCAWYRISLFSRWKQRGMYAMCIWVVQLLLVLSNMDSVFVFIPEYYLEALVDCFHVLRKSDPPFVSSTILIKRGLSSFVTFVVTHFNDPRISRADLRDLLLQSISVLVQYREYLEAFESNEAATQRMPKALLSAFDNRSWITVTNIFLRLCKGSGFSLSKNGESSSSSVFHWLLKEACINDKGLFSSFLNRLFNTLSWTMTEFSVYVREMQEKYQVMEFQQRKCCVIFDLSCNLARILEFCTHEIPQAFLSGHDTNLRRLTELIVFILNHISSAASAEFIDLSLRRHSQSSEKVNRGMILAPLTGIILNLLDATHLEEYREKNDLLDVFVSMDCPDAVHYGFQNLLDYICDGSFHGQALAAKYEQLENFHSLLTIRATIQHNKVDGAADTIPDDSLCCICYTCEADAQIAPCSHKSCYGCITRHLLNCQRCFFCNATVTDVSRIVEKTG* 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0470 1272 MobiDBLite consensus disorder prediction 692 728 - -
Lan14g0470 1272 Pfam Ubiquitin elongating factor core 722 958 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Lan14g0470 1272 Gene3D - 120 294 IPR043136 -
Lan14g0470 1272 PANTHER RING FINGER AND SRY DOMAIN-CONTAINING 40 1271 IPR045129 GO:0004842
Lan14g0470 1272 ProSiteProfiles B30.2/SPRY domain profile. 88 269 IPR001870 -
Lan14g0470 1272 SUPERFAMILY RING/U-box 1203 1262 - -
Lan14g0470 1272 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1212 1268 IPR013083 -
Lan14g0470 1272 Pfam SPRY domain 148 266 IPR003877 GO:0005515
Lan14g0470 1272 SUPERFAMILY Concanavalin A-like lectins/glucanases 130 281 IPR013320 -
Lan14g0470 1272 CDD RING-HC_RNF123 1218 1258 - -
Lan14g0470 1272 Pfam E3 ubiquitin-protein ligase RKP N-terminus 1 137 IPR045737 -
Lan14g0470 1272 SMART SPRY_3 146 268 IPR003877 GO:0005515
Lan14g0470 1272 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF123 40 1271 - -
Lan14g0470 1272 CDD SPRY_RNF123 137 265 IPR035773 -
Lan14g0470 1272 ProSiteProfiles Zinc finger RING-type profile. 1220 1254 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0470 Lan-Chr14 10110136 10121809 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0470 K12169 - gmx:100800617 2226.05