Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0348 ATGGGTGGATCAATTTCAAAACGGAGGAGATCTAGGCAAAGTTCATCTTCAAGAGGTTCACATTCCTGGTATCCTCAATACCAATCACCTTATCTGCCACAAACCCAAGGTAATGTTCCTCAGGCGTATTTTGGGAATCAACCTCAAACTCAAAGCTATGGTGGTGGTCATGTTCCAGAGCAAAGAAAGAGACTAGATAGGAAGTTTTCGAAGATAGATGATGATTATAATAGCTTGGAGCAGGTAACTGAGGCTCTGGCAGGTGCTGGCCTAGAGTCTTCCAATCTCATTGTTGGTATTGATTTTACAAAGAGCAATGAGTGGACAGGTGGAAGGTCGTTTCAAAGGAGATGCTTGCATCACATTGGTCATGAGCAAAATCCATATGAACAAGCTATATCTATCATCGGGAAAACATTGTCTTCCTTTGATGAGGATAACTTAATTCCATGTTTTGGATTCGGAGATGCATCAACACATGACCAGGAAGTTTTTAGTTTCTTTCCTGATGAGAGATTTTGTCATGGATTTGAAGAAGTGTTGGGACGGTATAAGGATTTGGTCCCTCAATTAAAGCTCGCAGGACCAACATCATTTGCCCCAGTCATTGAGATGGCAATCACCATAGTTGAGCAAAGTGGAGGCCAATACCATGTCCTATTGATTATAGCAGATGGACAGGTCACGAGAAGTGTTGACACCCAGAACGGGCAGTTGAGTGCACAAGAAAAGAAAACTGTAGAAGCCATTGTTAAAGCTAGTGAATATCCCCTGTCTATCATATTGGTTGGAGTTGGAGACGGGCCGTGGGACATGATGAGAGAATTCGATGATAACATCCCTGCCCGAGCCTTCGATAATTTCCAGTTTGTGAATTTCACGGAAATAATGTCAAAGAACATGGATCGGTCCAGAAAGGAAGCAGAGTTTGCACTTGCTGCCTTGATGGAAATACCCTCTCAGTACAAGGCAACCCTAGAACTTAATATATTGGGTAATCGTAGAGGGAAAGATATAGACAGGATCCCTCTGCCACCACCTCTATATGGTGCAGCATCTTTCAACTCCCCGAAAACTTCCCGTCAAAGCAGTTTCAGTCCTAGTGCACCATCTCAAGCTCACAGACATGATGTTGGCACGGACCGTTCTGCAAGTTCTGCTTCTGATAATCAGGTTTGTCCCATTTGCCTCACCGATCCGAAGAACATGGCATTTGGTTGCGGGCATCAGACATGCTGTGAGTGCGGACAAGATCTCGAGCTGTGCCCCATTTGCAGGAGTACCATTGACACTAGAATAAAACTTTATTAG 1311 0.4394 MGGSISKRRRSRQSSSSRGSHSWYPQYQSPYLPQTQGNVPQAYFGNQPQTQSYGGGHVPEQRKRLDRKFSKIDDDYNSLEQVTEALAGAGLESSNLIVGIDFTKSNEWTGGRSFQRRCLHHIGHEQNPYEQAISIIGKTLSSFDEDNLIPCFGFGDASTHDQEVFSFFPDERFCHGFEEVLGRYKDLVPQLKLAGPTSFAPVIEMAITIVEQSGGQYHVLLIIADGQVTRSVDTQNGQLSAQEKKTVEAIVKASEYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTEIMSKNMDRSRKEAEFALAALMEIPSQYKATLELNILGNRRGKDIDRIPLPPPLYGAASFNSPKTSRQSSFSPSAPSQAHRHDVGTDRSASSASDNQVCPICLTDPKNMAFGCGHQTCCECGQDLELCPICRSTIDTRIKLY* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0348 436 Pfam Copine 118 332 IPR010734 -
Lan14g0348 436 PANTHER RING-FINGER PROTEIN 1 436 - -
Lan14g0348 436 MobiDBLite consensus disorder prediction 353 373 - -
Lan14g0348 436 MobiDBLite consensus disorder prediction 353 388 - -
Lan14g0348 436 MobiDBLite consensus disorder prediction 1 60 - -
Lan14g0348 436 ProSiteProfiles Zinc finger RING-type profile. 393 426 IPR001841 -
Lan14g0348 436 Pfam Zinc finger, C3HC4 type (RING finger) 390 431 - -
Lan14g0348 436 SMART VWA_4 93 296 IPR002035 -
Lan14g0348 436 CDD RING-HC_RGLG_plant 392 436 IPR045317 GO:0061630|GO:0070534
Lan14g0348 436 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 369 436 IPR013083 -
Lan14g0348 436 SUPERFAMILY vWA-like 94 277 IPR036465 -
Lan14g0348 436 SUPERFAMILY RING/U-box 384 431 - -
Lan14g0348 436 PANTHER COPINE FAMILY PROTEIN 1 1 436 - -
Lan14g0348 436 MobiDBLite consensus disorder prediction 16 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0348 Lan-Chr14 7192391 7197322 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0348 K16280 - gmx:100809850 727.628