Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0241 ATGGATGGTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTACTACTACTACTACTACTAGTTCCCAAAAGATCTCTATATTTGGTGCTGCTTCTGCTGCTGCCAAATCTGGATTCGTGATTCCTAAAAACAAATTATCTGGTTCATTGGTTCCTGTTTTTCAAAAACAACAACATGGACCCATCATTCACAGGATAACTAAATGGGGAACTGATCTCACACATGATCCTCAGGTCACCAAGGGAAAGGCTTTAGCTTTACAGATTCGAGTACATCAAATTACGAAACAGTTGGAATCAGGAATATTGGAGGCTGAGAACACTCAAGACTTGAATCCAGATAAAACCAACTCTGACACTCAAATTAATATCATGACTGAAATACTCCAACTTGAAAAGCGGGAAGCGATAGGTGAAATACTCAAATTGGATCCTAGTTACAAACCTCCACCTGGTTTTAAACCCTTGTTCAAAGAGGCCACTGTTCCTTTGCCTGTCCAAGAATATCCTGGCTACAATTTTATTGGTTTAATATACGGGCCTGAAGGTGATAATCAAAAGCGACTAGAAAAGGAAACTGGTGCCAAGATAAAAGTTTACGGAACTAAAGCAGACACAGGAGAGAAAGGTGAAATTAAACCAGGAGCTGATAACAAGGGCAGTTATGATGAGATGCATGTTAATGTATCAGCTGATAGTTTTGATAAAGTTGATGTAGCAGTTTCCATCATTGAACTACTAATTACCTCTGTAATTGGGAATTTAGCTGCTAATTCCACACCCGCTGTATCAGTTTCCGAGGATAGCACTAATGTTCTAAGTCAAAGCAAAGATGGCTCCCCTTCTCATGCAGTTTCTGTGGCTTTGGCAAACCAGGCTATGGTGCAACCAGGACCAGCAGCTGTTTCACAAATTCATGGAGATCACTTTCAATACTCTGGTCCATGGTTTTCAGCAGTTCCGTCTCATGCACCTGTATTTGTTTCTTCTGCCAATATAGCCACTCCAAATCCATCAGGTCTTACCGGAACTCATTTTCCATCACAAACATTGAATCCTGCAAGCATGGCTTCAACTTTTGGTGCTCAACCTGGATTCCACCCAACTTTTCCAAATCAACATGTTTCTATGCAAGCGCCACTGCCAAGACAGATCTCACAGCATTCACATATTACTCAGGCAAGTCCTTTGGGTCACATTGGGCCACCCAGAAATCCTTCTATAATATATGCACAGAATTTGTCAGCTCCGAGAAATGCTTCACCAATAGGACAACCCCAGATATCAATGCCTTCTGCACAAAATAGTGCACCTGTGGCTGGTAAAATGTCTCTAGGTCTCAGCAACATGGGACCTATGCCTCCACCTGCAACACCTGTTTCTCTACATCAACAACTGGATATTGCATTTAAGCCACCGCAGTCTAATATGTCGATGATGCCACGATCTGCTGCTTTTCCTACACATCAAGCAGGATTTCCCCTTGGACTGCCCTCATCTTTGGGATCAATGCCTCGTCCACCTACTCATTCATCTGTAAACCATTTATCAGGACCTGGTTCATTTCCATTACGTCAGCAATCAGGAATACCCAATTCTGCTTCTAGAGTTGCTCCTTACCACACCAATGTTAAACCACCTATCTTGATGTCATCAAATTCTGGAAATTTTACTTTTCACTCGCAGCGGCCGAACACTGAGTTTCAATTTGTCTCAATACCAAACAGTCAAGCTACACAAGAACTGCCACCTTCAGGTCCACAGCCACTGCCATTTGGGTTTCCAAGGACACAAGTTCCCAACCAGGTGGATCAAACTCAAGCTCGTGCCTCTACTGTTCCCTTTGCAGGAAGATCAGGTTCTGTCTCAATTCCACCGAGAAATGCTGCATTCCCATATGCTGGTCAATCTCCAATCCCACAAATGGGTATGAAGAACTTTATTTCTGCACCTCAAATGCCAACTTTGCCTAATCCTGGTGTGCCAAGAAGCATGCACATTCAACACAATTATCCTGCTCAGAGGCCGTGGACTCTGAATCAGAAATTCGGCAGCAATCACACCATGGCATCTGGTAAGCCAGCATATCCTGTGGACCAGATTTATGATCCTTTTTCACCTACTTCTGTTGCAACTCCACAGCAGAAAGGTAATCCTGGAAAATGA 2172 0.4291 MDGASSSSSSSSSSSTTTTTTTSSQKISIFGAASAAAKSGFVIPKNKLSGSLVPVFQKQQHGPIIHRITKWGTDLTHDPQVTKGKALALQIRVHQITKQLESGILEAENTQDLNPDKTNSDTQINIMTEILQLEKREAIGEILKLDPSYKPPPGFKPLFKEATVPLPVQEYPGYNFIGLIYGPEGDNQKRLEKETGAKIKVYGTKADTGEKGEIKPGADNKGSYDEMHVNVSADSFDKVDVAVSIIELLITSVIGNLAANSTPAVSVSEDSTNVLSQSKDGSPSHAVSVALANQAMVQPGPAAVSQIHGDHFQYSGPWFSAVPSHAPVFVSSANIATPNPSGLTGTHFPSQTLNPASMASTFGAQPGFHPTFPNQHVSMQAPLPRQISQHSHITQASPLGHIGPPRNPSIIYAQNLSAPRNASPIGQPQISMPSAQNSAPVAGKMSLGLSNMGPMPPPATPVSLHQQLDIAFKPPQSNMSMMPRSAAFPTHQAGFPLGLPSSLGSMPRPPTHSSVNHLSGPGSFPLRQQSGIPNSASRVAPYHTNVKPPILMSSNSGNFTFHSQRPNTEFQFVSIPNSQATQELPPSGPQPLPFGFPRTQVPNQVDQTQARASTVPFAGRSGSVSIPPRNAAFPYAGQSPIPQMGMKNFISAPQMPTLPNPGVPRSMHIQHNYPAQRPWTLNQKFGSNHTMASGKPAYPVDQIYDPFSPTSVATPQQKGNPGK* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0241 723 ProSiteProfiles Type-1 KH domain profile. 175 246 - -
Lan14g0241 723 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 162 254 IPR036612 GO:0003723
Lan14g0241 723 MobiDBLite consensus disorder prediction 707 723 - -
Lan14g0241 723 Gene3D K Homology domain, type 1 155 277 IPR036612 GO:0003723
Lan14g0241 723 PANTHER RNA-BINDING KH DOMAIN-CONTAINING PROTEIN 20 718 - -
Lan14g0241 723 MobiDBLite consensus disorder prediction 690 723 - -
Lan14g0241 723 Pfam KH domain 175 242 IPR004088 GO:0003723
Lan14g0241 723 SMART kh_6 158 251 IPR004087 GO:0003676
Lan14g0241 723 PANTHER RNA-BINDING PROTEIN RELATED 20 718 IPR045071 -
Lan14g0241 723 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0241 Lan-Chr14 2656536 2661412 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0241 K13095 - gmx:100777227 831.247