Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0225 ATGCCAACCAAGAAAAAAACCTCCAAGCAAAATGCCAGTCAAGAATGTGGTAGTCCTAGAGTTTCAAGAGCACTTGGAAAGAAAGTCACTGACTTAATTACATCCTCTGCTAGAAAGAGTAAACCTGTTAGCACTCTTGGAAGTAAAACTGGAGACTCAATTCCCTCAATTGATTTGAGTACAGGATATGAATTTATGGATCATGGGATTTCCAATGTTTGTTTGGAAAATGATGAAGTTGATGGTACTTCAGTCGATTTTTTGGGTTGTAACAAGCAAGCTGTAAATCTCGAGTCTGGAACTATATTTTCTCCTGGATTTCACTTATCTAGAGGTTCTGGAGGGAAACCTGTTGACCGAGTTGATTTCGTCACAATTTTTAAGAATGAGGACCAAAAAAGAATATCTCCAGGCCAAGAAATGGAGTTATCACGAGAGAATTTCTTAGATGTCCATGTTAGTGAAGACACTGCGATGGAAGTGGACATAAATAATTCTTCCAACTACTCCAACATACCGAGATGTGATGATGATCTGGTTGCTTTAGGCACAAAAGATATGAACGATTGCAATTCTGACTTTGGTGGAAATGGTGGTGTTTCCATGGAAGTTTCTGCTATATATCTTGCCACGAAAAACTCAAAGCTGGAGTGTGTTGACGAGCATGGTCAGGATTCTATTTCTGAGTTATGCGAAGAGGATGATGAATTTGAGGACATTGATGATTTTGACCCTTACTTATTTATAAAGACCTTGCCAGACTTGTCAACGGTGGTTCCAACTTTCAGAAAGTTATTGTTACCTAAGCAGACAAGGAGTTGCCCTCGGACGACTCTAGTCCTGGACTTGGATGAGACTTTGGTGCATTCTACCTTGGAACCTTGTGAGGATGTAGACTTCACTTTTCCCGTAAATTTTAATTGTGAGGAGCACATTGTTTATGTACGCCGCCGTCCTCACCTTCAAGATTTCCTGGAGAGAGTTGCTGGCCTTTTTGAGATTATTATATTTACAGCTAGTCAAAGTATTTATGCTGAGAAACTTCTAAATGTGCTTGATCCGAAGCGCAAGATATTTCGCCACCGTGTGTACCGTGAATCATGTGTTTATGTGGAGGGCAATTACCTTAAAGACTTATCTGTGCTTGGTCGTGATTTGTCACGTGTTATAATAATTGACAACTCCCCACAGGCATTTGGGTTCCAGGTGGACAATGGAATACCAATTGAGAGTTGGTTTGATGATCGATCGGATCAAGAATTGCTTTTATTACTTCCATTTTTGGAGAGCTTGGTTGGGGTTGATGATGTAAGGCCACTGATTGCAAAGAAGTTCAACCTCCGGGAGAAAATTGCTGTGGCTGCACAACCTCTAAATACAAATGGAAGAGATTTCTTATCAGTATGA 1407 0.403 MPTKKKTSKQNASQECGSPRVSRALGKKVTDLITSSARKSKPVSTLGSKTGDSIPSIDLSTGYEFMDHGISNVCLENDEVDGTSVDFLGCNKQAVNLESGTIFSPGFHLSRGSGGKPVDRVDFVTIFKNEDQKRISPGQEMELSRENFLDVHVSEDTAMEVDINNSSNYSNIPRCDDDLVALGTKDMNDCNSDFGGNGGVSMEVSAIYLATKNSKLECVDEHGQDSISELCEEDDEFEDIDDFDPYLFIKTLPDLSTVVPTFRKLLLPKQTRSCPRTTLVLDLDETLVHSTLEPCEDVDFTFPVNFNCEEHIVYVRRRPHLQDFLERVAGLFEIIIFTASQSIYAEKLLNVLDPKRKIFRHRVYRESCVYVEGNYLKDLSVLGRDLSRVIIIDNSPQAFGFQVDNGIPIESWFDDRSDQELLLLLPFLESLVGVDDVRPLIAKKFNLREKIAVAAQPLNTNGRDFLSV* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0225 468 SUPERFAMILY HAD-like 265 442 IPR036412 -
Lan14g0225 468 CDD HAD_FCP1-like 278 409 - -
Lan14g0225 468 ProSiteProfiles FCP1 homology domain profile. 272 431 IPR004274 -
Lan14g0225 468 PANTHER INTERACTING FACTOR, PUTATIVE, EXPRESSED-RELATED 1 455 - -
Lan14g0225 468 Gene3D - 262 446 IPR023214 -
Lan14g0225 468 SMART forpap2 275 419 IPR004274 -
Lan14g0225 468 TIGRFAM HIF-SF_euk: dullard-like phosphatase domain 276 440 IPR011948 GO:0016791
Lan14g0225 468 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 1 455 - -
Lan14g0225 468 MobiDBLite consensus disorder prediction 1 23 - -
Lan14g0225 468 Pfam NLI interacting factor-like phosphatase 278 438 IPR004274 -
Lan14g0225 468 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0225 Lan-Chr14 2554362 2558856 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0225 K17616 K12778 gmx:100804307 716.072