Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0223 ATGTCGTTTGCATCATTCTCCATCCTCCGTCACACACCACCCTTCACCGCCACCACCTTCCTCCGCCGCCGCATCTCCATAGTCACCTCCGCCACCCGTCCTCAAAATCCAAAACAATACCAAAACCCAAACAACAAGAACATCTTAAAAGCAAAACAAAGCTTGAAGAAAGATTTGTCATCTTCGCATTCACTATCCCCAACCCTCTCATTGGAACACAAACCCTCCCTCTCTCCTTCCCAGGCCATCGGCACCGTCGCCGCTGCTCAGGCCAACTTCATGCGCGTCATCATCAATAATCCCAATAACGACCAAGTTCTAGAACCTTCTAATTCCAATAACGACCAAGTTCTAGAACCTTCTAACAAAAACGACGTCGTTTTAGAACCTCATAACAACTCGGGAATGGAATTGCTATGTGTTGTGAGAGCGTTGTTGAAGAAGATAAAGAGGAGAGTTATGGTTGGTGATAAGGTTGTAGTAGGTTCTATTGATTGGGTTGATCGTAGAGGTATGATTGAGAATGTGTTTCAGAGGAACACTGAGATTCTTGATCCTCCTGTTGCTAATGTGGATCATTTGCTTGTGCTTTTCTCTCTTGATCAACCCAAACTTGAACCTTTTTCATTGACTAGGTTTTTGGTTGAGGCTGAGTCCAATCATATTCCAATTACTCTTGCACTCAATAAGATGGAGCTTGTTGATAAAGAGACCGTAAGTTCCTGGAAGGCCAGGCTACGCAGCTGGGGATATGAGCCAATTGTTTGCAGTGTTGAATCCGGACATGGACTTGATCTTCTTGCATTCAAGTTAAGAGATCAGACAACTGTGGTTGTGGGCCCTAGTGGAGTTGGGAAGTCTAGTTTGATCAATGCCCTTAGAAGCAATCCTCGTGTTTCTGATACTGCAGACGGGGAAAATTGGTTTGAACCTATGTTAGGTAGCAAGTGGTCTGAGACGCAGCGAGTTGGGGAGGTTTCGACAAGAAGCGGTAGAGGGAAGCATACTACTCGCCATGTCTCTCTGCTTCCATTATCTGGAGGCGGTTATCTTGCTGATACTCCTGGGTTTAACCAGCCTAGCTTATTGAAAGTGACAAAGCAATCTCTTGCGCAAACGTTTCCCGAAATCAAGAAAGTGCTCAGCATGAATGAGTCTGCAAAGTGTTCATTTAACAATTGCTTGCATCTGGGTGAACCTGGGTGCGTTGTGAAGGGGGATTGGGAAAGATATTCATTCTATTTTCAACTTCTTGATGAAATTAGAATCAGAGAGGAGTTCCAGCTGAGGACATTTGGAACTAAAAGAGAAGGTGACGTAAGGTTCAAAATGGGAGATTTGGGTGTTCAGCAAGCAGAACCACGGTTGGAACCTAAGAAGCATAGGAGACAATCTAGGAAGAGAGTTAATCAGTCTATCTTAGATGAATTGGATGATGATGATGACGACACTCTACTTGATGAGGAGGATGACCCCATTCTAAGGGCATTGAGGAATGAAAATTCTTAG 1509 0.444 MSFASFSILRHTPPFTATTFLRRRISIVTSATRPQNPKQYQNPNNKNILKAKQSLKKDLSSSHSLSPTLSLEHKPSLSPSQAIGTVAAAQANFMRVIINNPNNDQVLEPSNSNNDQVLEPSNKNDVVLEPHNNSGMELLCVVRALLKKIKRRVMVGDKVVVGSIDWVDRRGMIENVFQRNTEILDPPVANVDHLLVLFSLDQPKLEPFSLTRFLVEAESNHIPITLALNKMELVDKETVSSWKARLRSWGYEPIVCSVESGHGLDLLAFKLRDQTTVVVGPSGVGKSSLINALRSNPRVSDTADGENWFEPMLGSKWSETQRVGEVSTRSGRGKHTTRHVSLLPLSGGGYLADTPGFNQPSLLKVTKQSLAQTFPEIKKVLSMNESAKCSFNNCLHLGEPGCVVKGDWERYSFYFQLLDEIRIREEFQLRTFGTKREGDVRFKMGDLGVQQAEPRLEPKKHRRQSRKRVNQSILDELDDDDDDTLLDEEDDPILRALRNENS* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0223 502 Pfam RsgA GTPase 176 362 IPR010914 GO:0003924|GO:0005525
Lan14g0223 502 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 181 360 IPR030378 GO:0005525
Lan14g0223 502 MobiDBLite consensus disorder prediction 53 77 - -
Lan14g0223 502 SUPERFAMILY Nucleic acid-binding proteins 131 179 IPR012340 -
Lan14g0223 502 MobiDBLite consensus disorder prediction 452 474 - -
Lan14g0223 502 CDD YjeQ_EngC 189 419 IPR004881 GO:0003924|GO:0005525
Lan14g0223 502 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 71 483 IPR004881 GO:0003924|GO:0005525
Lan14g0223 502 Gene3D - 175 362 IPR027417 -
Lan14g0223 502 TIGRFAM TIGR00157: ribosome small subunit-dependent GTPase A 153 296 IPR004881 GO:0003924|GO:0005525
Lan14g0223 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 421 IPR027417 -
Lan14g0223 502 ProSiteProfiles EngC GTPase domain profile. 189 358 IPR010914 GO:0003924|GO:0005525
Lan14g0223 502 Gene3D Probable gtpase engc; domain 3 364 426 - -
Lan14g0223 502 PANTHER SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA 1, MITOCHONDRIAL-RELATED 71 483 - -
Lan14g0223 502 MobiDBLite consensus disorder prediction 58 77 - -
Lan14g0223 502 Hamap Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 82 425 IPR004881 GO:0003924|GO:0005525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0223 K06949 - gmx:100796145 671.003