Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0956 ATGTCACAATCTCTCCAACTCCTCACCCCAAATCCCACTTTCTCCTTCATCCACCACCCAACTCCAAAACCCACCTTCCATTCATACTCCCCCATCATCTCAAAATCCAACCTTTCTCTCCGCTCCCAAAACCACCCATCACCGTCACATTCCGCCGTCGCCTCCGCCGCCACGGACTTAACCTCCATCGAGGTTGACGCGGTCACTGAAACGGAGCTGAAGGAAAATGGGTTCCGCAGCACGAGGAGAACGAAGTTGGTATGCACCATTGGACCAGTAACGTGTGGGTTCGAACAACTTGAGGCACTTGCGGTTGGAGGAATGAACGTGGCTAGAATCAATATGTGTCATGGAACGAGGGAATGGCATAAGATGGTGATTGAACGTGTTCGGAGGCTTAACCATGAGAAGGGTTATGCTGTGGCTGTTATGATGGATACTGAAGGTAGCGAGATTCATATGGGTGATCTTGGTGGTGTTTCTTCTGCAAAAGCTGAGGATGGTGAGATCTGGACTTTCAGTGTTAGAGCCTTTGATTCGACTCTTCCAGAGCACACCATCAATGTAAATTATGAGGGTTTTGCTGAAGATGTCAAAGTTGGGGATGAGCTTTTGTTGGATGGAGGAATGGTTAGGTTTGAGGTGATTGAAAAAATAGGCCCAGATGTTAAGTGTCGTTGTACTGATCCTGGGTTATTGCTGCCAAGAGCCAATCTTACTTTCTGGAGGAACGGGAGTGTTGTACGAGAAAAGAATTCCATGCTCCCTACAATCTCTTCAAAGGACTGGTTAGACATTGATTTTGGTATTTCTGAGGGTGTTGATTTCATTGCTATTTCGTTTGTCAAGACTGCTGAAGTTATTAATCATCTTAGAAGCTATATTGATGCACGATCTCCTAATAGTGACATTGCTCTCATTGCAAAGATAGAAAGTATTGACTCAGTGAAAAACTTGGAGGAGATCATTCAAGTATCTGATGGAGCTATGGTAGCAAGAGGAGACTTAGGTGCTCAGATTCCTTTAGAACAGGTTCCGGCTACCCAAGAGAGGATTGTTCAACTTTGCAGGCAGCTGAATAAGCCTGTTATTGTTGCCTCTCAGCTTCTCGAGTCAATGATTGAATATCCTACACCTACAAGAGCTGAAGTAGCAGATGTTTCTGAAGCAGTCAGACAACGAGCTGATGCATTGATGCTTTCAGGTGAGTCAGCCATGGGCCAATTCCCCGAGAAGTCCCTAACTGTCTTAAGGAGTGTGAGTTTGAGAATTGAAAGGTGGTGGAGGGAACAGAAACGATATGAAACTATTGCACACCCTTCAATTGGGACATCTCATTCAGAAAATATATCTGAAGAGATCTGCAATTCAGCTGCAAAGATGGCGAATATTTTAGAGGTGGACGCTCTTTTTGTCTTCACAAAGACAGGGCACATGGCATCTCTGCTATCACGTTGCCGTCCTGACTGCCCAATCTTTGCTTTTACTACCACACCATCTGTGCGTAGGCGTCTGAACCTCCAGTGGGGTCTTATACCATTTCGACTGAGCTTCTCTGATGATATGGAGACAAATCTCAATAAAACCTTTTCGTTGCTTAAGGCGAGAAATTTGATCAAATCCGGGGATCTAGTCATCGCTGTCTCGGATATGTTGCAGTCAATTCAAGTTATGAATGTTCCTTGA 1686 0.4502 MSQSLQLLTPNPTFSFIHHPTPKPTFHSYSPIISKSNLSLRSQNHPSPSHSAVASAATDLTSIEVDAVTETELKENGFRSTRRTKLVCTIGPVTCGFEQLEALAVGGMNVARINMCHGTREWHKMVIERVRRLNHEKGYAVAVMMDTEGSEIHMGDLGGVSSAKAEDGEIWTFSVRAFDSTLPEHTINVNYEGFAEDVKVGDELLLDGGMVRFEVIEKIGPDVKCRCTDPGLLLPRANLTFWRNGSVVREKNSMLPTISSKDWLDIDFGISEGVDFIAISFVKTAEVINHLRSYIDARSPNSDIALIAKIESIDSVKNLEEIIQVSDGAMVARGDLGAQIPLEQVPATQERIVQLCRQLNKPVIVASQLLESMIEYPTPTRAEVADVSEAVRQRADALMLSGESAMGQFPEKSLTVLRSVSLRIERWWREQKRYETIAHPSIGTSHSENISEEICNSAAKMANILEVDALFVFTKTGHMASLLSRCRPDCPIFAFTTTPSVRRRLNLQWGLIPFRLSFSDDMETNLNKTFSLLKARNLIKSGDLVIAVSDMLQSIQVMNVP* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0956 561 Pfam Pyruvate kinase, barrel domain 82 429 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 Gene3D - 150 256 IPR015806 GO:0004743|GO:0006096
Lan13g0956 561 SUPERFAMILY PK beta-barrel domain-like 151 242 IPR011037 -
Lan13g0956 561 SUPERFAMILY PK C-terminal domain-like 447 559 IPR036918 -
Lan13g0956 561 Gene3D - 425 551 IPR036918 -
Lan13g0956 561 PRINTS Pyruvate kinase family signature 139 155 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 PRINTS Pyruvate kinase family signature 274 288 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 PRINTS Pyruvate kinase family signature 306 332 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 PRINTS Pyruvate kinase family signature 333 357 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 PRINTS Pyruvate kinase family signature 358 382 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 PRINTS Pyruvate kinase family signature 383 401 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 PRINTS Pyruvate kinase family signature 402 418 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 TIGRFAM pyruv_kin: pyruvate kinase 82 550 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Lan13g0956 561 Pfam Pyruvate kinase, alpha/beta domain 452 551 IPR015795 -
Lan13g0956 561 ProSitePatterns Pyruvate kinase active site signature. 304 316 IPR018209 GO:0004743|GO:0006096
Lan13g0956 561 PANTHER PLASTIDIAL PYRUVATE KINASE 1, CHLOROPLASTIC 46 561 - -
Lan13g0956 561 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 65 431 IPR015813 GO:0003824
Lan13g0956 561 Gene3D - 82 424 IPR040442 -
Lan13g0956 561 PANTHER PYRUVATE KINASE 46 561 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0956 Lan-Chr13 13549290 13556759 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0956 K00873 - gmx:100787043 908.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0956 13 13549290 13556759 Lan13g0956 13 13549290 13556759 ECH