Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0862 ATGAGTGCATCTGAGGTAACAGCTGAAGTAACAGTAGTACATATTAATTTGAGTGATATACATAGTATTCCTCAGGAAGAAGTACACATTTCGTTGGAGTTAAACAAGGTTGATTATGAAGTAGAAAGAAAGAAATCACTGCAAGCACGCTATTATTTCGGCATTATATTCTTGATAATGAACTTTGTTGCATGGTTTTTCCGTGACTATGGACAAAGATTTATACCTTGGCTTCACTATATCAAAGTTTGTGGAATTAAAGGAGATGGTTGCTATCATTCATTGGGAGTTCTTCGTGTGAGTTTAGGATGCTATATATTTTTCTCAGTTATGTTTCTTAGTACAGTTAAAACTAGAAAGTTATTTGAAGGTCAGAATTCATGGCATTCTGGATGGTGGGAGCTGAAGTCTGTTTTATTGGTAGTATCAATGGCACTGCCATTCTTCTTTCCTTCACAAATTATTCAAATATATGGTGAAATTGCTCGTATTGGTGCCGGGATTTTTCTTCTATTACAACTTGTGAGTGTAGTACATTTCATCACTTGGTGGAATAAGTACTGGATTCCAAATGAAGAAAGGAAGCAGAGGTGTTTCCTTGGACTTTTTATGTCGACATTGTTTTATGTTGCCTCTATATGTGGAGTTGTATATATGTACACAACATATGCTTCAAGATCTTCATGTTCTCTCAATATATTTTTCATCACTTGGACTGCAATTCTGCTTGCTGTAATGTTGGTTGTATCCTTACATTCTAAGGTTAACAGAGGACTATTATCCTCAGGAATCATGGCTTCTTACATAGTTTTCTTGTGTTGGTGTGCAATTAGAAGTGAACCAGCCACCTTGAGATGTGAGACAAAAGACCAGGAGAAAAGAAATGGTGGTTGGATAACTATACTTGGCTTCCTCATTGCCATATTTGCGATTGTGATGGCAGCCTTTTCCACAGGCATTGATTCAAAATGCTTTCAGTTTTCCAAAGACAAAGTCAAAGATGAAGATAGTATTCCCTACAACTATGGATTTTTTCACATAGTATTCTCCTTGGGAGCAATGTATTTCGCAATGTTATTCATCAGTTGGGATCTGAATAACTCAGCCAGGAAGTGGAGTATTGATGTTGGCTGGGCAAGTACTTGGGTGAAAATCATCAACGAGTGGTTTGCAGCTACAATTTATATATGGATGCTGATTTCCCCAGTTGTGAGACAGAACAAAGTTATGGATAGTGATGGAACAATGCAGCAGACACCTGACTCATCTATGGCATAA 1278 0.3717 MSASEVTAEVTVVHINLSDIHSIPQEEVHISLELNKVDYEVERKKSLQARYYFGIIFLIMNFVAWFFRDYGQRFIPWLHYIKVCGIKGDGCYHSLGVLRVSLGCYIFFSVMFLSTVKTRKLFEGQNSWHSGWWELKSVLLVVSMALPFFFPSQIIQIYGEIARIGAGIFLLLQLVSVVHFITWWNKYWIPNEERKQRCFLGLFMSTLFYVASICGVVYMYTTYASRSSCSLNIFFITWTAILLAVMLVVSLHSKVNRGLLSSGIMASYIVFLCWCAIRSEPATLRCETKDQEKRNGGWITILGFLIAIFAIVMAAFSTGIDSKCFQFSKDKVKDEDSIPYNYGFFHIVFSLGAMYFAMLFISWDLNNSARKWSIDVGWASTWVKIINEWFAATIYIWMLISPVVRQNKVMDSDGTMQQTPDSSMA* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0862 425 PANTHER SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN 24 418 - -
Lan13g0862 425 Pfam Serine incorporator (Serinc) 330 407 IPR005016 GO:0016020
Lan13g0862 425 Pfam Serine incorporator (Serinc) 44 332 IPR005016 GO:0016020
Lan13g0862 425 PANTHER SERINE INCORPORATOR 24 418 IPR005016 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0862 Lan-Chr13 10275207 10282733 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0862 K23544 - gmx:100809533 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan13g0862 13 10275207 10282733 Lan8g1073 8 13578772 13583109 PCT
Lan13g0862 13 10275207 10282733 Lan20g0096 20 561485 564932 PCT
Lan13g0862 13 10275207 10282733 Lan4g1815 4 26736045 26739177 PCT
Lan8g1073 8 13578772 13583109 Lan13g0862 13 10275207 10282733 PCT
Lan20g0096 20 561485 564932 Lan13g0862 13 10275207 10282733 PCT
Lan4g1815 4 26736045 26739177 Lan13g0862 13 10275207 10282733 PCT