Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0571 ATGACCAAAGCCATAGTAGAAAACAACAACGACGAAGAACACCACTCTTTCTACGACTCTCACGACCGTTTAATCTCCAACACCAACTCTGAAAAAGACAGTTCCACTTCTACCTCCAACTCCGAAGACGACAATTACTCCTTTTCCAACTCTCCCACTCCAACTCATCATGACTCCAACTACCACATTTGGACTTCTCAACCCTCCTCCGTCTCCGAACGCCGCACCAATCTCCTCCGCAATTTCGGTCTCGCCGCTAACCCCCGCCGCAGTGCTCCTTCCTCCGCCGCCGGTCCTGATTTCTCCCGGTCACTCTCTTCTCGTTATCTGACCGGCACCGAGATTTGCCACGCCGCCGCGATTTTACGATCGAAATCAGACGGTGCGGCGAAGAGCGGGACTGGTTCGATTGTAAATAACAATAGGGAGGAGGGTTTGGAGAAGGTTGAAGAAGAAGCGTGGACGATAATAAAGGATCTTGATAACGGGAAAGAGTTTGTGGTGAATGAGGTTAGGGAAGACGGCATGGTTAACAAGGTTAAGGAAGTTGGGACAGGGAAGAATTTGACTATGGAGGAATTCGAAATGACCGTTGGGATTTCCCCAATTGTTCAAGAATTAATGCGGAGGCAAAATGTCGAGGAAGCTAATCGCAATGGTGTAGATTCCGGTCCGAATAATGATGATGCTGGTGGTGAGTGCAATGATAATGATGGTTTTAAGTTGAAAAAGAGAGGAAGTTGGTTCAAGAGTGTAATAAAGAGCGCTGTTTCGGCTCGTCTTCGGGAGAGGAGGGGGTGGAGTAGTGAAAGGGATACTGGCTCTGAGAAAGGTGGTGGGCGGTTGAGTTCCGCTACCGATGATAGCCAAGCTGATGGTTCATTTAATGGGGCTGAGAGAGTGAGGGTAAGACAGTATGGGAAATCATGTAAAGAGCTCAGTGGACTTTATAATATCCAGGAGATACAGGCTCATAATGGATCCATTTGGACTATAAAGTTTAGCTTGGATGGCAAGTATCTTGCTAGTGCAGGTGAGGATTGTGTGATTAATGTATGGAAGATTGTCGAATCTCGGAGCAAGAGGGAGTTGCTCGTGGACAAACAAGAAGATGGGAGTAATGTGAATACATTGTTGGTTGTGAATGGATCGCCGGAACCGGCTCTGCTGTCCCATGCTTTGGACAATCATTTGGAGCATAAGAGCATTGAGAGGAGGTCGTCTTTTAGCAGAAAACCATTGAGCTTGAATCAAATTGTAGTGCCAGAAACTGTGTTTGCACTTGAAGAAAACCCCGCTTGCTCCTTTAAAGGCCATCTCTATGACGTGCTTGACCTTTCTTGGTCCAAGTCTCAGCACTTGCTCTCGTCTTCGATGGACAAAACTGTCCGGCTGTGGCATTTGTCTAGCAAGTCATGCTTGAAGATTTTTTCACACAGTGACTATGTAACTTGCATCCAGTTCAATCCTGTTGATGATAAATACTTCATTAGCGGATCTTTGGATGCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTTGATTGGGCTGATCTGCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGTCAGGGTGCACTAGTTGGTTCATACAAGGGTCACTGCTATTTATATAATACGTCTGAAAATAAGTTGCAACAGAAAAGTCAGATCAATCTGAAGAACAGGAAAAAGAAATCGAATCGCAAGAAAATTACTGGCTTCCAGTTTGCCCCAGGAAGCTCAACTGAAGTTCTCATTACATCTGCTGATTCACGGATTCGGGTTGTTGATGGTGTTGATCTGGTTCATAAATATAAAGGTTTTGGGAATGCAAATAGCCAAATTTCGGCCTCCCTCACAGGAAATGGTAAATATATTGTCTCAGCTAGTGAGGATTCTTATGTATACATCTGGAAAAATGAATCTCATTCCAGACCTAACAGAAGTAAAAGTGTCACTGTCACAAGCTCATATGAACATTTTCACTGTAAGTATGTATCTGTGGCCATTCCTTGGCCTGGTATAGATGACGCATGGGAGATACATGATACATTTTGTGGTGACGAAATGGAGGTTGATGGTAACTTGGATGAAGTCTCATCTGCCAATCATCCTCCTACCCCTGTAGAGGAAAATTTTGTTACCGAGGGCTTCCAATCTGCAATGGGTTGCAAGAGTAGTCCATTTCAGGGAACTATTGCAAGTGCAACAAGTAATTACTTTTTTGATAGAATTTCCACCACATGGTCAGGGGGGAAATTTCCTCGAGCTGCAACGAACCGAAGCCCTCGTGTCAGTGTGAGCCAAAACATGTCAGCATGGGGTATGGTGATTGTAACTGCCGGCCTTCGAGGGGAAATCAGGACTTTTCAAAATTTTGGGTTGCCTCTTCGGACATAA 2415 0.4509 MTKAIVENNNDEEHHSFYDSHDRLISNTNSEKDSSTSTSNSEDDNYSFSNSPTPTHHDSNYHIWTSQPSSVSERRTNLLRNFGLAANPRRSAPSSAAGPDFSRSLSSRYLTGTEICHAAAILRSKSDGAAKSGTGSIVNNNREEGLEKVEEEAWTIIKDLDNGKEFVVNEVREDGMVNKVKEVGTGKNLTMEEFEMTVGISPIVQELMRRQNVEEANRNGVDSGPNNDDAGGECNDNDGFKLKKRGSWFKSVIKSAVSARLRERRGWSSERDTGSEKGGGRLSSATDDSQADGSFNGAERVRVRQYGKSCKELSGLYNIQEIQAHNGSIWTIKFSLDGKYLASAGEDCVINVWKIVESRSKRELLVDKQEDGSNVNTLLVVNGSPEPALLSHALDNHLEHKSIERRSSFSRKPLSLNQIVVPETVFALEENPACSFKGHLYDVLDLSWSKSQHLLSSSMDKTVRLWHLSSKSCLKIFSHSDYVTCIQFNPVDDKYFISGSLDAKVRIWSIPDRQVVDWADLHEMVTAACYTPDGQGALVGSYKGHCYLYNTSENKLQQKSQINLKNRKKKSNRKKITGFQFAPGSSTEVLITSADSRIRVVDGVDLVHKYKGFGNANSQISASLTGNGKYIVSASEDSYVYIWKNESHSRPNRSKSVTVTSSYEHFHCKYVSVAIPWPGIDDAWEIHDTFCGDEMEVDGNLDEVSSANHPPTPVEENFVTEGFQSAMGCKSSPFQGTIASATSNYFFDRISTTWSGGKFPRAATNRSPRVSVSQNMSAWGMVIVTAGLRGEIRTFQNFGLPLRT* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0571 804 MobiDBLite consensus disorder prediction 1 72 - -
Lan13g0571 804 Pfam WD domain, G-beta repeat 472 509 IPR001680 GO:0005515
Lan13g0571 804 Pfam WD domain, G-beta repeat 432 466 IPR001680 GO:0005515
Lan13g0571 804 Pfam WD domain, G-beta repeat 319 354 IPR001680 GO:0005515
Lan13g0571 804 Gene3D - 410 673 IPR015943 GO:0005515
Lan13g0571 804 MobiDBLite consensus disorder prediction 264 296 - -
Lan13g0571 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 322 363 IPR001680 GO:0005515
Lan13g0571 804 MobiDBLite consensus disorder prediction 279 293 - -
Lan13g0571 804 MobiDBLite consensus disorder prediction 1 28 - -
Lan13g0571 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 436 476 IPR001680 GO:0005515
Lan13g0571 804 SMART WD40_4 603 644 IPR001680 GO:0005515
Lan13g0571 804 SMART WD40_4 429 467 IPR001680 GO:0005515
Lan13g0571 804 SMART WD40_4 315 354 IPR001680 GO:0005515
Lan13g0571 804 SMART WD40_4 470 509 IPR001680 GO:0005515
Lan13g0571 804 SMART WD40_4 557 602 IPR001680 GO:0005515
Lan13g0571 804 SMART WD40_4 512 550 IPR001680 GO:0005515
Lan13g0571 804 PRINTS G protein beta WD-40 repeat signature 341 355 IPR020472 -
Lan13g0571 804 PRINTS G protein beta WD-40 repeat signature 454 468 IPR020472 -
Lan13g0571 804 PRINTS G protein beta WD-40 repeat signature 496 510 IPR020472 -
Lan13g0571 804 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 436 470 - -
Lan13g0571 804 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 476 510 - -
Lan13g0571 804 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 134 803 - -
Lan13g0571 804 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN-RELATED 1 116 - -
Lan13g0571 804 PANTHER WD REPEAT DOMAIN 44 1 116 IPR040324 -
Lan13g0571 804 PANTHER WD REPEAT DOMAIN 44 134 803 IPR040324 -
Lan13g0571 804 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 322 355 - -
Lan13g0571 804 MobiDBLite consensus disorder prediction 216 237 - -
Lan13g0571 804 MobiDBLite consensus disorder prediction 29 72 - -
Lan13g0571 804 ProSiteProfiles Trp-Asp (WD) repeats profile. 476 510 IPR001680 GO:0005515
Lan13g0571 804 SUPERFAMILY WD40 repeat-like 317 648 IPR036322 GO:0005515
Lan13g0571 804 Gene3D - 294 400 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0571 Lan-Chr13 4467164 4472734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0571 434 705 Acyl Lipid Metabolism Gene Families AT3G18860 23.028 1.23e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0571 K20241 - gmx:100806518 944.88