Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0557 ATGCCCACCACGTTATCCTCTTATTCCAATGGCGAAGAAGCCCAGGACCACCGAACACCGCTCCTTCCTCCGTTGTCGAAGCCCGGCGAACTGGAAAAGCTAAGCATCGACGAGATGCTGCAGAAGTATTGCGGCGAGTTCGGGCGTTGGCAGCTGAGGCACTTCATCCTAACCAACCTGGCTTGGGCCTTGGAAGCGTTTCACACCATGGTTATGATATTTGCGGACCGTGAACCTGAGTGGCGGTGTCGTAATGGTGCGGCTGGTTTTGGTTGTGATGCCTCCGCTAAGAGCGTGTGCCAGCTTGAACCAGGTTCGTGGGAATGGATCGGAGACAAGGCCGCAACTACTGTTGCAGAATGGGGTTTGGTTTGTGGTGATAAATTTAAGGTTGGGCTTGTTCAGGCCGTGTTCTTCGGCGGCTGCATGATTGGTGCTGGAATATTTGGTCATCTCTCAGATTCCTCATTAGGAAGAAAAGGCTCTCTAATAGTGGTTTGTATCCTAAACACCATTTTTGGCACCTTAACATCATTTTCTCCAAACTACTGGACCTATGTCTTGTTCCGCCTCCTCACTGGTTGTAGCACCGGCGGTGTAGGCCTCTGCGCCTTTGTCCTCGCCACCGAGCCCGTGGGCCTTCAAATGCGCGGCGTAGCTGGCATGTGTACATTCTACTTCTTCGCTGGCGGCATCGTCATCCTCGCTGGCATTGCTTACATCTTCCAAACATGGCGTAACCTCTACCTTGCCACTTCTTTACCCTCCCTTCTCTTCATAGTCCTTGTTCTTCCCTTCATCTCTGAATCACCAAGATGGTACCTCATACGAGGAAGAATCAAAGAAGCCATGAATGTCATGTCCAACATTGCTACCTCCAACGGTAACCATCTTCCACAAGGTGTTCTTCTAACCTTAGATGAAGAATCATCATCATCATCACCATTATCATCATCAACAAACCTAGACCAAGCGTACTTGGAACAAGTGAAGGACAAAGATGCTGTGACAGGGTCTCTTTTGGATGTGATTCGTTCACCATTAACACGTACACGTTTGTTTCTAGCAGTGGTAATAAACTTCCTATGTTCTGTGGTATATTATGGTTTGAGCCTAAACGTGGTGAACATGGAAACAAACATTTATCTTAATGTGGTACTAAACGCCGTGGCTGAGTGTCCAGCGTTCTTGGTAACAGCGTTATTGTTGGACAGGGTAGGAAGGAAGCCATTAACAATAGGAACATTGTGGTTCAGTGGGTTCTTCTGCTTCATTGGGGCTTTGGTGAGTAATGTTGGGGTGTGGAAAGGGGTGAAAATGGTGTGTGGAATTTTAGGAATATTTGGAATGGCCGGAACTTATAACTTGCTATTTATCTACACGACAGAACTGTTCCCAACGGTGGTGAGGAACGCGGCGCTTGGGTGCGCCACACAGGCGGCGCAAATGGGTGCAATATTGGCGCCGATGATGGTTGTTTTGGGTGGGTGGTTGCCGTTTGGGGTGTTTGCATTTTGTGGGATAGCTGGTGGGATCTTTGCATTTTACCTACCTGAGACACTAAACCAACCTCTCTATGATACAATGACCGGAATAGAAGGCTGA 1605 0.4841 MPTTLSSYSNGEEAQDHRTPLLPPLSKPGELEKLSIDEMLQKYCGEFGRWQLRHFILTNLAWALEAFHTMVMIFADREPEWRCRNGAAGFGCDASAKSVCQLEPGSWEWIGDKAATTVAEWGLVCGDKFKVGLVQAVFFGGCMIGAGIFGHLSDSSLGRKGSLIVVCILNTIFGTLTSFSPNYWTYVLFRLLTGCSTGGVGLCAFVLATEPVGLQMRGVAGMCTFYFFAGGIVILAGIAYIFQTWRNLYLATSLPSLLFIVLVLPFISESPRWYLIRGRIKEAMNVMSNIATSNGNHLPQGVLLTLDEESSSSSPLSSSTNLDQAYLEQVKDKDAVTGSLLDVIRSPLTRTRLFLAVVINFLCSVVYYGLSLNVVNMETNIYLNVVLNAVAECPAFLVTALLLDRVGRKPLTIGTLWFSGFFCFIGALVSNVGVWKGVKMVCGILGIFGMAGTYNLLFIYTTELFPTVVRNAALGCATQAAQMGAILAPMMVVLGGWLPFGVFAFCGIAGGIFAFYLPETLNQPLYDTMTGIEG* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0557 534 ProSitePatterns Sugar transport proteins signature 1. 399 415 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lan13g0557 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 36 532 - -
Lan13g0557 534 MobiDBLite consensus disorder prediction 1 26 - -
Lan13g0557 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 54 522 IPR020846 GO:0022857
Lan13g0557 534 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 36 532 - -
Lan13g0557 534 Gene3D MFS general substrate transporter like domains 111 530 IPR036259 -
Lan13g0557 534 Pfam Sugar (and other) transporter 127 527 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lan13g0557 534 SUPERFAMILY MFS general substrate transporter 127 525 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0557 Lan-Chr13 4308768 4312166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0557 12 533 Organic Solute Cotransporters AT3G20660 64.829 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0557 K08202 - gmx:100805613 817.379