Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0551 ATGCAGCTTCATATATCACCAAGTTTAAGGCATGTCACTTTGCTTCCGGGAAAAGGGTTGAGGGAGTTTATCAAAGTGAAAGTTGTATCAAGGAAGCTTTCTTATCGGATGCTCTTCTATGCACTATTGTTCTTCACATTTCTGCTACGGTTTGTGTTTGTTTTGACAGCAGTGGATAGCATTGATGGAGAAAACAAGTGTTCTACCATAGGTTGCCTGGGAAAAAAACTTAGGCCAAAGATATTGGCAAGAAGTCTTGAATCAAGTGTCCCCGAAGTGATGTATGGTATATTAGATCAACCCCTTGGTAAAGATGAGCTAGAGGGAAGGTCTGATATTCCACAAACTTTAAAAGAGTTTATGACCGAAATGAAGGAAGGTGGATATGATGCCAAGGCATTTGCAATTAAACTAAGAGAAATGGTAAGCCTTATGGAACAAAGGACCAGGATAGCCAAAATTCAAGAATATTTGTATCGTCATATCGCATCAAGCAGCATACCTAAAGAGCTTCACTGTCTTCACTTGAGGCTGGCCAATGAGCACGCTAGCAATGCAGCAGCACGCCTTCAGCTACCACCCGCAGAACTAGTCCCAGCTCTGGTTGACAACTCCTACTTCCATTTTGTCCTTGCATCGGACAATGTTATCGCCGCCTATGTGGTTGCAACATCACTTGTCCGCAACAGTCTGCGACCTCAGAAAGTTGTTCTGCACATAATTACAGATAAAAAGACTTATTATCCTATGCAGGCTTGGTTTTCTTTGCACCCTTTATCACCTGCTGTGATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTTCAAAGGGAAAGGTGCCTGTGCTGGAAGCTATGGAAAAAGATCAACAGGTGCGGTCACAGTTTAGAGGGGGTTCATCATCTATTGTTGCAAATACTGGTGAGAAGCCTAATGTTATTGCAGCAAAGTTGCAAGCACTTAGTCCAAAGTATAATTCTGTGATGAACCACATCAGGATACATCTACCAGAGTTGTTCCCAAGTCTTGACAAGATAGTTTTCCTCGATGATGACATTGTAGTACAAACCGATCTTTCACCTCTGTGGGACATTGACATGGATGGAAAAGTTAATGGAGCAGTAGAAACATGCACTGGAGAAGATAAATTTGTTATGTCAAAGAGGCTAAAAAGCTATTTGAACTTTTCTCACCCTCTAATATCCAAAAAGTTTGATCCCAATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGACCTAGAGGCTTGGAGGAACACCAATATAAGCCTTACATACCATTACTGGGTTGAGCAGAATATAAAATCAGACCTAAGTTTGTGGCAGCTAGGAACATTACCTCCCGGATTAATAGCGTTCCACGGCCATGTCCACAATATTGATCCTTTCTGGCACATGCTGGGATTGGGATACCAGGAAAATACAAGTTTAGCAGAAGCTAAGAGTGCCGGAGTCGTCCATTTCAATGGCAGGGCAAAGCCATGGCTACATATAGCTTTGCCACAACTTAGGTCATTGTGGACCAAGTATATTGACTTTTCGGATAACATCATCAGGAGTTGTCACATTAGGGAATCATCATAA 1605 0.4193 MQLHISPSLRHVTLLPGKGLREFIKVKVVSRKLSYRMLFYALLFFTFLLRFVFVLTAVDSIDGENKCSTIGCLGKKLRPKILARSLESSVPEVMYGILDQPLGKDELEGRSDIPQTLKEFMTEMKEGGYDAKAFAIKLREMVSLMEQRTRIAKIQEYLYRHIASSSIPKELHCLHLRLANEHASNAAARLQLPPAELVPALVDNSYFHFVLASDNVIAAYVVATSLVRNSLRPQKVVLHIITDKKTYYPMQAWFSLHPLSPAVIEVKALHHFDWFSKGKVPVLEAMEKDQQVRSQFRGGSSSIVANTGEKPNVIAAKLQALSPKYNSVMNHIRIHLPELFPSLDKIVFLDDDIVVQTDLSPLWDIDMDGKVNGAVETCTGEDKFVMSKRLKSYLNFSHPLISKKFDPNECAWAYGMNIFDLEAWRNTNISLTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHNIDPFWHMLGLGYQENTSLAEAKSAGVVHFNGRAKPWLHIALPQLRSLWTKYIDFSDNIIRSCHIRESS* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0551 534 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 12 531 - -
Lan13g0551 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 526 IPR029044 -
Lan13g0551 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 12 531 IPR029993 GO:0047262
Lan13g0551 534 CDD GT8_like_1 207 519 - -
Lan13g0551 534 Pfam Glycosyl transferase family 8 206 505 IPR002495 GO:0016757
Lan13g0551 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0551 Lan-Chr13 4259049 4262506 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0551 1 533 Glycosyltransferase AT5G54690 77.570 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0551 K20867 - gmx:100777811 942.184