Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0546 ATGAAGAAAAGGGAGTGCCATCCATTGTTGAAGGGAGAGAGAGAGGAGAGCAAATACAAACATGGGTTTTCTGGTGCTGAGATGAAATCACTAGCAAGCATATGTGAGATTGTGTTGCCATCTTTGTCAATGAATTCTTTAAAAATAGAAAAGGAACATGAAGCTGATCATGAGAATAACAAGGATGTGGAGTCTTTCTGGAACACTTCTGGTTCTTTCTATCCAATCCCTCATGAGGTGGCAGAAATGTTAACAAAAAGGGGCTTAATAGAAGCAGTAATATTGATTAGAGTGGTTTTATGCTTTCTGGCAACAAGGTTGGGAACCTTGTTGCTTTGTGGCTTTCTGTGTTTTAGTGGCAAATGGCCCTATATCAACAACTTCTCAAGCATATCTTTGGACAAAAGAGAAAAAGTTATGCAGAAATGGCTGAAGCATAGGTTCCTCACACCTATTAGACTTGCATTTGTTTACATCAAAATCTTGTGCCTCTTTGTTTTCTTCTCATGGGTTGATGAAAATGGGGTCAACCCAGCATGGAATGCCATTGGATATGTGGTGTCCACCAATGAGAAATTGACCAATGGCTCCAACAAGAGGCCACTTGAAAAGGGGGTTATAGAAACCATGTATGAATCTGACTCAACTCTTCAACAATCTCTAGTTAACAAGGGCCTCAATGTAACACTGGACTCCAAAAACAACATCCTCAAAATCAAATGTGATGCACTAGTCATTGGGTCTGGCAGTGGTGGTGGTGTTGCAGCTTCTGTTCTTTCAAGTGCTGGCTTCAAAGTGGTTGTTGTTGAGAAAGGCAACTATTTTGTTCCTCAAGATTATTCATCTCTAGAAGGGCCTTCACTGAATCAATTATATGAAAGTGGAGGAGTCCTTGCTTCTGCGGACTCAAGAATTCTACTTTTAGCAGGATCAACTGTGGGTGGTGGCTCAGCAGTTAATTGGTCAGCATGTATTAAAACACCACAAAATGTTATGAAAGATTGGTCTGAGGAACACAAGCTTCCACTCTTTCAAAGCCTAGAGTACCTCTCAGCAATGGAAACTGTGTGTGAAAAGATTGGTGTCACTGAAATTTGCACACATGAGGGGTTCCAGAATCAAGTACTAAGAAAAGGGTGTCAGAATCTTGGACTCAAAGTTGATTATGTGCCAAGAAACTCATCAGGGAATCATTACTGTGGCTCCTGTGGTTATGGTTGTCCAACAGGTGAGAAACAAGGGACTCAAGTTACATGGCTTGTTGATGCTGTTGACAATGGTGCAGTTATAATAACAGGATGCAAAGCTGAGAGACTCTTGTTTGAAAGCAACAAAAATGTAAGTGGTAAAAATAAAAAATGCTTGGGAGTGATGGCTAAAACTTTAAGCAGCACAGTCACAATGAAGTTGCAAATTGAAGCCAAAGTAACAGTTTCTGCAGGTGGGGCACTTCTCACACCACCTTTGATGATCTCAAGTGGTTTAAGGAACAAGAACATTGGTAGGAACCTTCATCTGCATCCTGTACTAATGACATGGGGTTACTTTCCAGATTCAAATTCAGACCTAAAAGGTAAAGTCTTTGAAGGAGGTATAATCACATCAGTTCATAAAGTGCAATCACCTAGCTACACCAAATCAGAAGCAAAAGCTATAATTGAAACTCCTTTATTAGGGCCAGCTTCTTTTGCTTCACTATGCCCTTGGGAGTCTGGTCTTGACTTCAAAAAAAGAATGCTGAAGTATCCAAGAACTTCCCATTTAATCACAATAATAAGAGACATGGCTTGTGGAGAAGTAACAAGAGAGGGAAGAATCAGCTACAAACTGAGTAAAGTTGACAAAGAAAACATGAAAGCTGGGGTGCAACAAGCACTAAGGATTCTAATAGCTGCAGGAGCAGTTGAAGTAGGGACACATAGAAGTGATGGCCAGAGAATAAACTGCAATGAGATTAGTGAAAATGAAGTGGAAGAGTTGTTAGAGAATGTGAATCCATTGGAGGGTGCACTGTCACAAGGTGAGAATTGGAATATATATACTTCTGCACATCAAATGGGTAGTTGCAGAATGGGAGTGAATGAAAAAGAAGGTGCAGTTAATGAAAATGGAGAGAGTTGGGAAGCACAAGGTTTGTTTGTTTGTGATGCAAGTTTACTTCCTTCTGCTGTTGGTGTTAATCCCATGATCACAATCCAGTCAATTGCTTTCTGTATCTCAAATAGAATAGTTGATCATCTTAGAAGTTTGTGA 2253 0.4012 MKKRECHPLLKGEREESKYKHGFSGAEMKSLASICEIVLPSLSMNSLKIEKEHEADHENNKDVESFWNTSGSFYPIPHEVAEMLTKRGLIEAVILIRVVLCFLATRLGTLLLCGFLCFSGKWPYINNFSSISLDKREKVMQKWLKHRFLTPIRLAFVYIKILCLFVFFSWVDENGVNPAWNAIGYVVSTNEKLTNGSNKRPLEKGVIETMYESDSTLQQSLVNKGLNVTLDSKNNILKIKCDALVIGSGSGGGVAASVLSSAGFKVVVVEKGNYFVPQDYSSLEGPSLNQLYESGGVLASADSRILLLAGSTVGGGSAVNWSACIKTPQNVMKDWSEEHKLPLFQSLEYLSAMETVCEKIGVTEICTHEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPTGEKQGTQVTWLVDAVDNGAVIITGCKAERLLFESNKNVSGKNKKCLGVMAKTLSSTVTMKLQIEAKVTVSAGGALLTPPLMISSGLRNKNIGRNLHLHPVLMTWGYFPDSNSDLKGKVFEGGIITSVHKVQSPSYTKSEAKAIIETPLLGPASFASLCPWESGLDFKKRMLKYPRTSHLITIIRDMACGEVTREGRISYKLSKVDKENMKAGVQQALRILIAAGAVEVGTHRSDGQRINCNEISENEVEELLENVNPLEGALSQGENWNIYTSAHQMGSCRMGVNEKEGAVNENGESWEAQGLFVCDASLLPSAVGVNPMITIQSIAFCISNRIVDHLRSL* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0546 750 Gene3D - 581 746 IPR036188 -
Lan13g0546 750 Gene3D - 226 546 IPR036188 -
Lan13g0546 750 PIRSF Lg_Ch_AO 9 750 IPR012400 GO:0046577
Lan13g0546 750 SUPERFAMILY FAD/NAD(P)-binding domain 239 748 IPR036188 -
Lan13g0546 750 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 748 - -
Lan13g0546 750 Pfam GMC oxidoreductase 242 509 IPR000172 GO:0016614|GO:0050660
Lan13g0546 750 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 3 748 - -
Lan13g0546 750 Pfam GMC oxidoreductase 605 737 IPR007867 GO:0016614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0546 Lan-Chr13 4185885 4197947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0546 82 747 Acyl Lipid Metabolism Gene Families AT3G23410 62.593 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0546 K17756 - gmx:100776182 1183.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0545 7 4116640 4120665 Lan13g0546 13 4185885 4197947 LSH