Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0476 ATGGATAATCTGCAAACTTCTGTTGAAGCTAATGATCAAGAATGGAAACAAAGGTGCAACAAGAGGATGGAGAAATTGAAGATTACACGGATCCCCATTCGTGATGTACCTTTGCAAAAAGGACTAGAGCAGGAGAAACTTCATGATGAGAAACATATAATGAATTTTGAGTTGTATGAAGCTGTTGAGAATGGAAATGTGGATATGTTTGTTGATGTGGTGGAACAAGTATTTACCAACACAGAACTAACATTGTTTGCTATTTTTGATCAAGTCACACCATCAGGTGATTCATTGCTTCATGTAGCAGCTGATTTGGGGAGAGAACAGATTGCAGAGCTAATTGCATATCACTTTCCTGGACTTCTTTTCGGGACAAACATCAAACGCGATACTGCACTTCATGCTGCTGCAAGGTTTAAGAATTCTAATGTAATCAAGATCATTCTCTCACAAGTTGAAGGTTTAACGAAATTAACGAATGCAAACGGGGATACTCCTTTGCATGTAGCTGTGTGTAGCAGGCATCTTGGTGGTATTACTGAACTTTTACTTGCAGATAGTCATGTGGTTCATTATTTGAACAATTCGGGCAAATCGCCACTGTATTTGGCTGCTATTACCGGGGATGTAGACATTCTTGATCTTTTACTACAGACTCCATTCCCATCCAACAAGCCCCTCCCACAATGTCATGGGAATTCTCCGCTTCATGCAGCCATTTTTGAACGAAATTCAGCTATATTGAACGAGATACTGAAGAGAAAACCAGAGCTAATTTACTTAAGAGATGAAGATGGAGGGACTTCCCTTCATTATGCGGCATATATCGGTTATGTTGAGGGTGTCCGCATACTGTTAAACATATCTACACTAACTGCCCTAGAACGAAACAGGAAGGGAGACCTTCCTATTCACCTTGCTTGCAAGAGAGGCCATGTTCAAGTGGTTGAAGAATTGCTTCAAAAAGAATGGCCTAATCCTAGAGTTTTCCTAAACCATTTGGGCCAGAACATCCTTCATGTTGCAGCAAAGAGTGGAAAAATTAATGTGATAAGGTACCTCTTGAGAAACAAAAAGATTGACTGGTTCACATTAAATGAGAAGGACAACAACGGTGACACTCCATTGCATTTAGCGTCAAGAAACTTATTTGTCGGGGTTCTAAATGAAATAGCGCGAGATAAGAGGATCGACGTGAACCTCCTGAATAATGAAGGCTTATCAGCTCATGATGTTGTTTTGATGCATTCTAAATTTCCAAGCACTATTCGAGAGTATTTAGCCCTGGCAATCTTGTCATCTGCCGGCGTACCCCGGAATAAAAAGACAACTAGTACATTGACTCGCCAAAAAAATGACGGGATCAAGGATGGAATCAGCACACTTATGCTTGTTGCTATACTCATAGCCACAGTAACATTTGTAGCTGGTTTCACCCTGCCAAGTAGTATCTACAATTTGAACAATTCAGACCAACACAAAAGTTGCATGACAGGTTTGGTTAATAAGCCAATGTTTCAAGTATTCACAATATGCAACACAATATCAATGTTTAGTTCTACAACTGGATCTTTTATTCTCTTGTGGGGGCAACTTGGAGATTTCAATTTAGCAGGTAGTGCCTTCATTTTTGCATTGCAAATGGTGGGTGTGGCTCTTATGACTATGTCTGTGGCTTTTATGGCTGCTCTGCGTTTGGTTGCTAGTAACTTTTCATGGCTTACCAATATCGTCACCATTATTGGAAGCTTATTCCTCTTGTTGATTGTGTTGCTCTACATTTTATTGATTTTTCCACTCAAATTTCGCCACCCTCTAATTCTATGTCTAGCCAGCCTTTGTATTGAAATTCTAATTTTGTTTGATGGAAGTTCAGATAAAGTTATGGCCAAGTTTCAACAAAACAAAAACTCTCAGCAAGTTGACAAGCTCAAAGATCAGTAG 1947 0.396 MDNLQTSVEANDQEWKQRCNKRMEKLKITRIPIRDVPLQKGLEQEKLHDEKHIMNFELYEAVENGNVDMFVDVVEQVFTNTELTLFAIFDQVTPSGDSLLHVAADLGREQIAELIAYHFPGLLFGTNIKRDTALHAAARFKNSNVIKIILSQVEGLTKLTNANGDTPLHVAVCSRHLGGITELLLADSHVVHYLNNSGKSPLYLAAITGDVDILDLLLQTPFPSNKPLPQCHGNSPLHAAIFERNSAILNEILKRKPELIYLRDEDGGTSLHYAAYIGYVEGVRILLNISTLTALERNRKGDLPIHLACKRGHVQVVEELLQKEWPNPRVFLNHLGQNILHVAAKSGKINVIRYLLRNKKIDWFTLNEKDNNGDTPLHLASRNLFVGVLNEIARDKRIDVNLLNNEGLSAHDVVLMHSKFPSTIREYLALAILSSAGVPRNKKTTSTLTRQKNDGIKDGISTLMLVAILIATVTFVAGFTLPSSIYNLNNSDQHKSCMTGLVNKPMFQVFTICNTISMFSSTTGSFILLWGQLGDFNLAGSAFIFALQMVGVALMTMSVAFMAALRLVASNFSWLTNIVTIIGSLFLLLIVLLYILLIFPLKFRHPLILCLASLCIEILILFDGSSDKVMAKFQQNKNSQQVDKLKDQ* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0476 648 ProSiteProfiles Ankyrin repeat region circular profile. 197 219 - -
Lan13g0476 648 ProSiteProfiles Ankyrin repeat profile. 300 323 IPR002110 GO:0005515
Lan13g0476 648 ProSiteProfiles Ankyrin repeat profile. 266 288 IPR002110 GO:0005515
Lan13g0476 648 ProSiteProfiles Ankyrin repeat region circular profile. 335 358 - -
Lan13g0476 648 SUPERFAMILY Ankyrin repeat 90 415 IPR036770 -
Lan13g0476 648 ProSiteProfiles Ankyrin repeat profile. 197 219 IPR002110 GO:0005515
Lan13g0476 648 ProSiteProfiles Ankyrin repeat profile. 163 196 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 232 261 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 129 158 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 300 330 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 197 226 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 372 402 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 266 294 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 95 124 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 163 193 IPR002110 GO:0005515
Lan13g0476 648 SMART ANK_2a 335 363 IPR002110 GO:0005515
Lan13g0476 648 Pfam Domain of unknown function 455 567 IPR026961 -
Lan13g0476 648 Pfam Ankyrin repeats (many copies) 234 287 IPR002110 GO:0005515
Lan13g0476 648 Gene3D - 251 420 IPR036770 -
Lan13g0476 648 ProSiteProfiles Ankyrin repeat region circular profile. 163 185 - -
Lan13g0476 648 PANTHER ANKYRIN REPEAT PROTEIN-LIKE 54 564 - -
Lan13g0476 648 PANTHER MOLTING PROTEIN MLT-4 54 564 - -
Lan13g0476 648 ProSiteProfiles Ankyrin repeat region circular profile. 266 288 - -
Lan13g0476 648 ProSiteProfiles Ankyrin repeat region circular profile. 300 323 - -
Lan13g0476 648 Gene3D - 53 250 IPR036770 -
Lan13g0476 648 ProSiteProfiles Ankyrin repeat profile. 335 358 IPR002110 GO:0005515
Lan13g0476 648 Pfam Ankyrin repeats (3 copies) 305 401 IPR002110 GO:0005515
Lan13g0476 648 Pfam Ankyrin repeats (3 copies) 123 185 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan13g0476 131 591 Miscellaneous Gene Families AT2G31820 26.004 4.60e-30 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0476 - - aip:107632631 602.438