Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0459 ATGGCTCCCGATCCTAATCGCGCCGCCGACGCCGGAGCCAGCTCCAGCGGCACCGTCAAAGACGACGCCGTCACGAAGAAGAAGGTGGAAAGTGAAGATCTATCGGATGAGGATTTGGCGTTAAAGCAGCAGCTGGAGTTGTATGTGGAGAGGGTTCAAGATTCTGACCCTGGATTGCAGAAAGTTGCCCTTGAGAGCATGAGACAAGAAATTCGAACTTCAACAAGCTCCATGACATCAGTTCCCAAGCCATTGAAGTTTCTTCGTCCTCATTATGGAACTCTGAAGGCTTATTATGAGACTATGGCAGAGTCTGACTTGAAGAAGTACTTAGCAGACATATTATCAGTATTGGCTCTTACAATGTCTGCTGAGGGAGAACGGGAAAGCCTTAAATTCAGATTATTGGGCTCATCAGGTGATATCGGGTCATGGGGCCATGAGTATGTCAGGAATCTTGCTGGAGAAATTGCACAAGAGTATGCGAAAAGACAGACTGATGAATCCCCCATAGAGGAACTCATGGAACTCGTCCAACAAATAGTTGCTTTTCATATGAAGCATAATGCAGAGCCTGAAGCAGTAGATCTTCTGATGGAGGTTGAAGATCTTGACATGTTGATTGAACATGTTGACAAGACTAATTTTAAAAGGACCTGCATATATCTCACCAGTTCCGCTAGATACCTTCCCGGACCAGATGATATGTTAGTCTTGGACATTGCCTATTTGATCTATCTAAAATTTGAGCAATATCCAAATGCACTCCAAATTGCTTTGTTCCTGGATAATATGCAGTATGTGAGGCAGGTGTTTACTTCTTGTGATGATGTGCTGCGAAAGAAGCAATTCTGTTACATGCTTGGACGTCATGGAATTACTTTTGAGCTTGATGAGGAGATGGTAGCCAATGATGAGGACAGAGAAGCATTGCAGGAAATCTTAAACAATTCTAAGTTAAGTGAAGGGTATCTGACACTTGCCCGTGATATTGAAGTTATGGAGCCAAAGTCCCCAGAGGATATATACAAGGCACACTTGCTCGACGGCCGGGCTAGTGCCGGTGCTAGTGTTGATTCAGCTAGACAGAACCTTGCTGCCACTTTTGTTAATGCATTTGTAAATGCTGGCTTTGGACAGGATAAGTTAATGACTGTCCCATCAGACTCTTCTAGCAGTGCTTCTTCTGGAAATTGGCTTTTCAAAAATAAGGAACATGGGAAAACTAGTGCTGCAGCTAGTCTTGGTATGATTTTGCTCTGGGATGTTGATTCTGGTCTTGCACAAATTGACAAGTACTTCCATAGTAATGATAATCATGTCATTGCTGGTGCTTTATTGGGAGTTGGAATTGTCAACAGCAGTATCAAGAATGACTGTGATCCCGCGATGGCACTTCTAGGTGAGTATACTGAAAAGGAAGACAGTTCAATCAGGATTGGTGCAATTATGGGATTGGGAATTGCATATGCAGGTTCCCAGAATGAACAGTTACGTTACAAATTAGCACCCATACTGAATGATGCCAAAGCTTCACTTGACGTGATTGCTTTCACTGCAATTTCGTTGGGCTTGATCTATGTGGGTTCTTGCAATGAGGAAGTTGCCCAAGCAATTATCTTCGCTCTAATGGACCGGAGTGAGTCAGAGTTGGGAGAGCCCCTCACACGACTTTTACCTCTTGGTTTAGGTCTTTTATATCTTGGGAAGCAGGAAAGTGTGGAGGCAACTGCCGAAGTTTCCAAGACTTTCAATGAAAAAATTAGGAAGTATTGTGACATGACACTACTATCATGTGCCTATGCAGGAACTGGGAATGTTCTCAAGGTTCAAAATCTATTGGGTCACTGTTCACAACATCTTGACAAAGGTGAAACTCACCAGGGTCCTGCTGTGCTTGGAATTGCTATGGTAGCAATGGCTGAAGAATTAGGTGTGGAGATGGCAATTCGATCTTTAGAACATCTTCTACAATATGGAGAGCAAAATATTCGCCGAGCGGTTCCTCTGGCACTTGGTCTACTTTGTATTTCAAATCCAAAGGTCAATGTTATGGATACCTTAAGCAGGCTTAGCCATGATACTGATTCCGAAGTAGCAATGGCAGCTGTAATCTCCTTGGGTTTGTTAGGAGCTGGAACCAACAATGCCCGTATTGCTGGCATGCTTCGCAATCTATCAAGCTATTACTACAAGGATACCAGTCTTCTATTTTGTGTGCGAATTGCCCAAGGTCTTGTGCATTTGGGAAAGGGTTTATTAACGCTTAATCCATATCATTCTGATCGCCTCCTACTATCACCGACAGCGCTTGCTGGACTAATTACCATGTTGCATGCTTGCCTTGATATGAAAGCAATCGTGTTAGGAAAATACCACTATGTACTCTACTTCCTTGTTTTGGCAATGCAGCCGAGGATGTTGTTGACGGTGGATGAGAACTTAAAGCCTTTATCAGTGCCTGTTCGTGTTGGTCAAGCAGTAGATGTTGTTGGACAGGCAGGTCGTCCTAAAACAATCACTGGTTTCCAGACCCACTCCACCCCTGTCCTTCTGGCTGCTGGAGACAGGGCAGAGCTAGCAACAGAAAAATATATTCCCATCTCCCCAATTCTTGAAGGTTTTGTAATTTTGAAGGAGAATCCAGATTATAGGGAAGAGTGA 2664 0.4373 MAPDPNRAADAGASSSGTVKDDAVTKKKVESEDLSDEDLALKQQLELYVERVQDSDPGLQKVALESMRQEIRTSTSSMTSVPKPLKFLRPHYGTLKAYYETMAESDLKKYLADILSVLALTMSAEGERESLKFRLLGSSGDIGSWGHEYVRNLAGEIAQEYAKRQTDESPIEELMELVQQIVAFHMKHNAEPEAVDLLMEVEDLDMLIEHVDKTNFKRTCIYLTSSARYLPGPDDMLVLDIAYLIYLKFEQYPNALQIALFLDNMQYVRQVFTSCDDVLRKKQFCYMLGRHGITFELDEEMVANDEDREALQEILNNSKLSEGYLTLARDIEVMEPKSPEDIYKAHLLDGRASAGASVDSARQNLAATFVNAFVNAGFGQDKLMTVPSDSSSSASSGNWLFKNKEHGKTSAAASLGMILLWDVDSGLAQIDKYFHSNDNHVIAGALLGVGIVNSSIKNDCDPAMALLGEYTEKEDSSIRIGAIMGLGIAYAGSQNEQLRYKLAPILNDAKASLDVIAFTAISLGLIYVGSCNEEVAQAIIFALMDRSESELGEPLTRLLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLKVQNLLGHCSQHLDKGETHQGPAVLGIAMVAMAEELGVEMAIRSLEHLLQYGEQNIRRAVPLALGLLCISNPKVNVMDTLSRLSHDTDSEVAMAAVISLGLLGAGTNNARIAGMLRNLSSYYYKDTSLLFCVRIAQGLVHLGKGLLTLNPYHSDRLLLSPTALAGLITMLHACLDMKAIVLGKYHYVLYFLVLAMQPRMLLTVDENLKPLSVPVRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGDRAELATEKYIPISPILEGFVILKENPDYREE* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0459 887 Pfam RPN1 N-terminal domain 45 347 IPR040892 -
Lan13g0459 887 MobiDBLite consensus disorder prediction 1 36 - -
Lan13g0459 887 PIRSF 26S_protsm_Rpn1 2 887 IPR016643 GO:0000502|GO:0030234|GO:0042176
Lan13g0459 887 SUPERFAMILY ARM repeat 42 751 IPR016024 -
Lan13g0459 887 Pfam 26S proteasome non-ATPase regulatory subunit RPN1 C-terminal 831 884 IPR041433 -
Lan13g0459 887 MobiDBLite consensus disorder prediction 21 36 - -
Lan13g0459 887 Gene3D - 350 793 IPR011989 -
Lan13g0459 887 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 21 886 - -
Lan13g0459 887 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 HOMOLOG 21 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0459 Lan-Chr13 3383415 3392865 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0459 K03028 - gmx:100777078 1578.92