Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan13g0447 ATGAAATCTGCGATAAAAAAGAAGCAAATAATCAAAATGGAAAAGAGAGAAAATGGAAATAGAGTGGTGATCTTAGGAGGAGGTGTTGCTGGTTCTCTCGTCGCTAAATCTCTCCAATTCGATGCCCATGTCACTCTCATTGATCCGAAGGAGTATTTTGAGATTCCATGGGCAAACTTGAGGGCAATGGTTGAGCCAACCTTCGCAGAGAGGACTTTAATCAACCACAGAGATTACCTCACCAATGGCGACATTGTTACGTCCAGTGTCGTCAATGTGACGGAGACTGAAGTGTTGACTGCAGATGGCTGTCAGATTGCTTATGACTATCTTGTTATTGCCACTGGCCATGCAGATCCTGTCCCGAAAACTAGGAGTGAAAGACTTGATCAGTACAAAGCAGAAAATCAAAAGATAAAATCTGCGAATTCCATTTTGATTGTTGGAGGAGGTCCCACTGGTGTGGAACTAGCTGGAGAGATAGCTGTTGATTTTCCAGAAAAGAAGATTACACTAGTGCATAAAGGATCAAGGCTTCTGGAATTCATCGGGGCAAAAGCTGCTGATAAGACTCTAAATTGGTTGGAATCAAGGAATGTTGAGGTGAAACTAGAGCAATCAGTCGACTTGAACTCTGTTACAGATGGATACTATCAGACTTCACATGGAGAGACCATTGACGCAGATTGTCATTTTCTATGCATAGGCAAACCACTTGCTTCAGGATGGCTTAGGGAAACTGTGTTGAAGAATGACATGGATTCTCAAGGTAGGATTAAGGTAGATGAACTTCTAAGAGTCAAGGGTCGGAGCAACATTTTTGCAATCGGAGATATTACAGACATTCCTGAAATAAAGCAGGGTTTTTTGGCACAAAAGCATGCTGAAGTGGTTGTGAAGAACTTGAAGGTGATAATGGAGGGAGGAAGAGAGTGTAGGTTGGTAACTTACAAGCCGCTAAGTTCGGTCTTGGCAATAGTTTCACTCGGGAGGAAAGATGCGGTGGCGCAGTTCCCATTCCTGACAATCAGTGGAAGAATTCCTGGCTTCATAAAGTCTGGGGATCTGTTTGTTGGTAAAACAAGAAAACAAATGGGACTCACTTCTTGA 1110 0.4279 MKSAIKKKQIIKMEKRENGNRVVILGGGVAGSLVAKSLQFDAHVTLIDPKEYFEIPWANLRAMVEPTFAERTLINHRDYLTNGDIVTSSVVNVTETEVLTADGCQIAYDYLVIATGHADPVPKTRSERLDQYKAENQKIKSANSILIVGGGPTGVELAGEIAVDFPEKKITLVHKGSRLLEFIGAKAADKTLNWLESRNVEVKLEQSVDLNSVTDGYYQTSHGETIDADCHFLCIGKPLASGWLRETVLKNDMDSQGRIKVDELLRVKGRSNIFAIGDITDIPEIKQGFLAQKHAEVVVKNLKVIMEGGRECRLVTYKPLSSVLAIVSLGRKDAVAQFPFLTISGRIPGFIKSGDLFVGKTRKQMGLTS* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan13g0447 369 PANTHER APOPTOSIS-INDUCING FACTOR 1 17 368 - -
Lan13g0447 369 Gene3D - 18 361 - -
Lan13g0447 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 22 41 - -
Lan13g0447 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 108 126 - -
Lan13g0447 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 144 162 - -
Lan13g0447 369 PRINTS FAD-dependent pyridine nucleotide reductase signature 258 280 - -
Lan13g0447 369 SUPERFAMILY FAD/NAD(P)-binding domain 21 251 IPR036188 -
Lan13g0447 369 PANTHER APOPTOSIS-INDUCING FACTOR HOMOLOG B-LIKE 17 368 - -
Lan13g0447 369 Pfam Pyridine nucleotide-disulphide oxidoreductase 21 284 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan13g0447 Lan-Chr13 3249404 3252610 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan13g0447 K22745 - gmx:100813439 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0393 7 2669025 2672220 Lan13g0447 13 3249404 3252610 LSH